MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3863 · 29 genes shown · anchor espE · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3863 (family_assigned) — hypothetical protein Rv3863 espE (requalified) — type VII secretion system ESX-1 associated protein espE espG1 (requalified) — type VII secretion system ESX-1 adaptor EspG1 espG1 eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 espF (requalified) — type VII secretion system ESX-1 associated protein espF whiB6 (family_assigned) — transcriptional regulator WhiB6 whiB6 eccA1 (family_assigned) — type VII secretion system ESX-1 AAA family ATPase eccA1 espH (requalified) — type VII secretion system ESX-1 associated protein espH cfp6 (requalified) — low molecular weight protein antigen 6 cfp6 espI (family_assigned) — MinD/ParA family protein espI PPE68 (family_assigned) — PPE family protein PPE68 PPE68 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 eccCb1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCb1 eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 esxA (requalified) — ESAT-6 protein EsxA esxA whiB3 (family_assigned) — redox-responsive transcriptional regulator WhiB3 whiB3 Rv0726c (requalified) — class I SAM-dependent methyltransferase Rv0726c phoP (requalified) — two-component system response regulator PhoP phoP whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 Rv2520c (dark) — DUF3618 domain-containing protein Rv2520c Rv1109c (requalified) — lipid droplet-associated protein Rv1109c Rv3311 (family_assigned) — primosomal protein Rv3311 Rv3212 (family_assigned) — hypothetical protein Rv3212 rseA (requalified) — anti-sigma E factor RseA rseA Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.