MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3858c · 40 genes shown · anchor gltB · open gene page → · ← back to 1 hop

Evidence: Min score 0
gltD (family_assigned) — glutamate synthase subunit beta gltD gltB (family_assigned) — glutamate synthase large subunit gltB Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 glnA4 (family_assigned) — glutamine synthetase family protein glnA4 glnA2 (family_assigned) — glutamine synthetase family protein glnA2 glnA3 (family_assigned) — glutamine synthetase family protein glnA3 rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB purF (requalified) — amidophosphoribosyltransferase purF gdh (requalified) — NAD-glutamate dehydrogenase gdh glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS carA (family_assigned) — glutamine-hydrolyzing carbamoyl-phosphate synthase carA fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB ephB (requalified) — epoxide hydrolase EphB ephB ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 Rv2857c (requalified) — 3-oxoacyl-ACP reductase Rv2857c Rv2859c (requalified) — gamma-glutamyl-gamma-aminobutyrate hydrolase Rv2859c aldC (requalified) — aldehyde dehydrogenase AldC aldC Rv1879 (family_assigned) — amidohydrolase family protein Rv1879 Rv1188 (requalified) — proline dehydrogenase Rv1188 rocD1 (family_assigned) — Probable ornithine aminotransferase (N-terminus pa rocD1 gadB (requalified) — glutamate decarboxylase gadB pyrB (family_assigned) — aspartate carbamoyltransferase catalytic subunit pyrB pyrC (requalified) — dihydroorotase pyrC pyrF (requalified) — orotidine-5'-phosphate decarboxylase pyrF Rv1382 (requalified) — transporter Rv1382 argG (requalified) — argininosuccinate synthase argG purM (requalified) — phosphoribosylformylglycinamidine cyclo-ligase purM purD (requalified) — phosphoribosylamine--glycine ligase purD purQ (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purQ purL (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purL purH (requalified) — bifunctional phosphoribosylaminoimidazolecarboxami purH Rv2475c (family_assigned) — thioesterase family protein Rv2475c garA (requalified) — glycogen accumulation regulator GarA garA aspC (requalified) — pyridoxal phosphate-dependent aminotransferase aspC mrsA (requalified) — phosphoglucosamine mutase mrsA pyrR (family_assigned) — bifunctional pyr operon transcriptional regulator/ pyrR

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.