MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3857c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3857c (family_assigned) — membrane protein Rv3857c Rv3856c (family_assigned) — PHP domain-containing protein Rv3856c Rv0104 (family_assigned) — cyclic nucleotide-binding domain-containing protei Rv0104 Rv1231c (family_assigned) — DUF1003 domain-containing protein Rv1231c Rv0145 (requalified) — class I SAM-dependent methyltransferase Rv0145 ctpB (requalified) — cation-translocating P-type ATPase ctpB pimE (requalified) — mannosyltransferase pimE Rv0950c (family_assigned) — M23 family metallopeptidase Rv0950c Rv1230c (family_assigned) — lytic transglycosylase domain-containing protein Rv1230c Rv0885 (requalified) — diiron oxygenase Rv0885 PE15 (family_assigned) — PE family protein PE15 PE15 sucC (family_assigned) — ADP-forming succinate--CoA ligase subunit beta sucC Rv2367c (requalified) — endoribonuclease Rv2367c gltB (family_assigned) — glutamate synthase large subunit gltB ligC (requalified) — ATP-dependent DNA ligase ligC hisI (requalified) — phosphoribosyl-AMP cyclohydrolase hisI hisB (requalified) — imidazoleglycerol-phosphate dehydratase HisB hisB frdA (family_assigned) — fumarate reductase (quinol) flavoprotein subunit frdA frdB (family_assigned) — succinate dehydrogenase iron-sulfur subunit frdB frdD (family_assigned) — fumarate reductase subunit FrdD frdD Rv1004c (family_assigned) — hypothetical protein Rv1004c PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 Rv1232c (requalified) — magnesium transporter Rv1232c Rv1233c (family_assigned) — DUF4190 domain-containing protein Rv1233c Rv1234 (requalified) — general stress protein Rv1234 mrp (family_assigned) — Mrp/NBP35 family ATP-binding protein mrp sugA (family_assigned) — trehalose ABC transporter permease SugA sugA Rv0146 (requalified) — class I SAM-dependent methyltransferase Rv0146 Rv0144 (family_assigned) — transcriptional regulator Rv0144 Rv0148 (family_assigned) — SDR family oxidoreductase Rv0148 Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 Rv0149 (family_assigned) — NADPH:quinone oxidoreductase family protein Rv0149 Rv0143c (requalified) — chloride channel protein Rv0143c ctpA (requalified) — heavy metal translocating P-type ATPase ctpA sodC (family_assigned) — superoxide dismutase family protein sodC ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c Rv0324 (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv0324 Rv1158c (dark) — hypothetical protein Rv1158c Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c Rv0955 (family_assigned) — DUF6350 family protein Rv0955 Rv0051 (family_assigned) — glycosyltransferase family 87 protein Rv0051 Rv1157c (dark) — hypothetical protein Rv1157c aftD (family_assigned) — DUF3367 domain-containing protein aftD fbpB (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.