MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3855 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
ethR (family_assigned) — HTH-type transcriptional regulator EthR ethR Rv0158 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0158 Rv3060c (family_assigned) — FCD domain-containing protein Rv3060c Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 Rv1019 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1019 Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 kstR2 (family_assigned) — TetR family transcriptional regulator KstR2 kstR2 mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 parD1 (family_assigned) — type II toxin-antitoxin system ParD family antitox parD1 Rv3488 (family_assigned) — PadR family transcriptional regulator Rv3488 iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 lysE (requalified) — L-lysine exporter lysE Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c vapB30 (requalified) — type II toxin-antitoxin system antitoxin VapB30 vapB30 vapB34 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB34 Rv1395 (family_assigned) — HTH-type transcriptional regulator Rv1395 sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR Rv1152 (family_assigned) — GntR family transcriptional regulator Rv1152 Rv0038 (family_assigned) — YqgE/AlgH family protein Rv0038 Rv0653c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0653c Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c Rv3182 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to Rv3182 Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 Rv1776c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1776c Rv1359 (family_assigned) — transcriptional regulator Rv1359 embR (requalified) — response regulator transcription factor EmbR embR fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 Rv3555c (family_assigned) — DUF559 domain-containing protein Rv3555c kstR (family_assigned) — cholesterol catabolism transcriptional regulator K kstR Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c mftB (requalified) — mycofactocin biosynthesis chaperone MftB mftB mftC (requalified) — mycofactocin radical SAM maturase mftC Rv0690c (family_assigned) — DUF2332 domain-containing protein Rv0690c cobB (requalified) — NAD-dependent protein deacylase cobB tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv1931c (family_assigned) — transcriptional regulator Rv1931c parE1 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to parE1 lrpA (family_assigned) — transcriptional regulator LrpA lrpA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.