MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3847 · 45 genes shown · anchor sodA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3847 (requalified) — peptidase Rv3847 sodA (requalified) — superoxide dismutase sodA Rv2525c (family_assigned) — DUF1906 domain-containing protein Rv2525c lprC (family_assigned) — DUF3558 domain-containing protein lprC lprB (family_assigned) — DUF3558 domain-containing protein lprB Rv1171 (family_assigned) — hypothetical protein Rv1171 Rv0822c (family_assigned) — LCP family protein Rv0822c Rv1776c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1776c Rv0185 (family_assigned) — TIGR04338 family metallohydrolase Rv0185 Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c Rv3163c (dark) — DUF58 domain-containing protein Rv3163c Rv2001 (requalified) — acyl-[acyl-carrier-protein] thioesterase Rv2001 Rv3166c (family_assigned) — DUF4129 domain-containing protein Rv3166c rplQ (requalified) — 50S ribosomal protein L17 rplQ rplO (requalified) — 50S ribosomal protein L15 rplO rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rplM (requalified) — 50S ribosomal protein L13 rplM rplC (requalified) — 50S ribosomal protein L3 rplC Rv2367c (requalified) — endoribonuclease Rv2367c Rv3668c (requalified) — protease Rv3668c ripD (family_assigned) — NlpC/P60 family peptidoglycan-binding protein RipD ripD pirG (requalified) — exported repetitive protein pirG Rv1158c (dark) — hypothetical protein Rv1158c aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC rplS (requalified) — 50S ribosomal protein L19 rplS rplT (requalified) — 50S ribosomal protein L20 rplT rpmA (requalified) — 50S ribosomal protein L27 rpmA rplU (requalified) — 50S ribosomal protein L21 rplU rplN (requalified) — 50S ribosomal protein L14 rplN mshB (requalified) — N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D- mshB Rv0875c (dark) — DUF2771 domain-containing protein Rv0875c adnA (requalified) — ATP-dependent DNA helicase AdnA adnA dusB (requalified) — tRNA dihydrouridine synthase DusB dusB phoY2 (requalified) — phosphate signaling complex protein PhoU phoY2 iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv1359 (family_assigned) — transcriptional regulator Rv1359 tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv0184 (dark) — DUF2786 domain-containing protein Rv0184 bglS (requalified) — beta-glucosidase BglS bglS Rv0183 (requalified) — monoacylglycerol lipase Rv0183 Rv2792c (family_assigned) — IS607-like element IS1537 family transposase Rv2792c tnpB (family_assigned) — IS607 family element RNA-guided endonuclease TnpB tnpB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.