MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3843c · 46 genes shown · anchor glpQ1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3843c (family_assigned) — DUF4328 domain-containing protein Rv3843c glpQ1 (requalified) — glycerophosphodiester phosphodiesterase glpQ1 Rv1610 (family_assigned) — TIGR02234 family membrane protein Rv1610 Rv3435c (family_assigned) — DUF4436 domain-containing protein Rv3435c papA5 (requalified) — phthiocerol/phthiodiolone dimycocerosyl transferas papA5 Rv3166c (family_assigned) — DUF4129 domain-containing protein Rv3166c Rv0713 (dark) — DUF4436 domain-containing protein Rv0713 Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 Rv2164c (family_assigned) — hypothetical protein Rv2164c Rv1111c (family_assigned) — DUF6542 domain-containing protein Rv1111c lmeA (requalified) — mannan chain length control protein LmeA lmeA lprB (family_assigned) — DUF3558 domain-containing protein lprB cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv2277c (requalified) — glycerolphosphodiesterase Rv2277c glpQ2 (requalified) — glycerophosphodiester phosphodiesterase glpQ2 glpD1 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD1 glpD2 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD2 glpK (requalified) — glycerol kinase GlpK glpK trpE (requalified) — anthranilate synthase component I trpE trpC (requalified) — indole-3-glycerol phosphate synthase TrpC trpC bcpB (requalified) — peroxiredoxin BcpB bcpB Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA Rv3434c (family_assigned) — rhomboid-like protein Rv3434c Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c Rv2067c (requalified) — class I SAM-dependent methyltransferase Rv2067c drrB (family_assigned) — daunorubicin ABC transporter permease DrrB drrB drrC (family_assigned) — ABC transporter permease drrC ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE drrA (family_assigned) — daunorubicin ABC transporter ATP-binding protein D drrA ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC Rv3163c (dark) — DUF58 domain-containing protein Rv3163c Rv3165c (dark) — hypothetical protein Rv3165c moxR3 (family_assigned) — MoxR family ATPase moxR3 Rv3162c (family_assigned) — integral membrane protein Rv3162c Rv3899c (family_assigned) — hypothetical protein Rv3899c Rv1682 (family_assigned) — hypothetical protein Rv1682 Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c ptrp (family_assigned) — hypothetical protein ptrp cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ Rv2079 (family_assigned) — alpha/beta hydrolase Rv2079 pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB ftsQ (requalified) — cell division protein FtsQ ftsQ rsmH (requalified) — 16S rRNA (cytosine(1402)-N(4))-methyltransferase R rsmH mraZ (requalified) — division/cell wall cluster transcriptional repress mraZ

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.