MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3835 · 46 genes shown · anchor serS · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3835 (family_assigned) — septum formation family protein Rv3835 Rv3836 (family_assigned) — metallopeptidase family protein Rv3836 Rv3909 (dark) — hypothetical protein Rv3909 serS (requalified) — serine--tRNA ligase serS Rv2843 (family_assigned) — hypothetical protein Rv2843 Rv2164c (family_assigned) — hypothetical protein Rv2164c Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 Rv1111c (family_assigned) — DUF6542 domain-containing protein Rv1111c ptrp (family_assigned) — hypothetical protein ptrp Rv2709 (dark) — DUF3099 domain-containing protein Rv2709 mce4F (family_assigned) — virulence factor Mce family protein mce4F iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR Rv3658c (family_assigned) — type II secretion system F family protein Rv3658c murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ mutT4 (requalified) — NUDIX hydrolase mutT4 sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM rsmA (requalified) — anti-sigma-M factor RsmA rsmA Rv3906c (requalified) — pullulanase Rv3906c cysS1 (requalified) — cysteine--tRNA ligase cysS1 Rv2133c (family_assigned) — SCO1664 family protein Rv2133c valS (requalified) — valine--tRNA ligase valS yidD (requalified) — membrane protein insertion efficiency factor YidD yidD Rv2844 (family_assigned) — ferritin-like domain-containing protein Rv2844 nusA (requalified) — transcription termination factor NusA nusA rimP (requalified) — ribosome maturation factor RimP rimP pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB ftsQ (requalified) — cell division protein FtsQ ftsQ rsmH (requalified) — 16S rRNA (cytosine(1402)-N(4))-methyltransferase R rsmH mraZ (requalified) — division/cell wall cluster transcriptional repress mraZ eno (requalified) — phosphopyruvate hydratase eno Rv1025 (dark) — hypothetical protein Rv1025 ppx2 (requalified) — exopolyphosphatase Ppx2 ppx2 mfd (requalified) — transcription-repair coupling factor mfd lpqU (requalified) — lytic murein transglycosylase lpqU ychF (requalified) — redox-regulated ATPase YchF ychF Rv1109c (requalified) — lipid droplet-associated protein Rv1109c Rv0996 (family_assigned) — hypothetical protein Rv0996 Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv0539 (requalified) — dolichyl-phosphate sugar synthase Rv0539 Rv0540 (family_assigned) — DUF2064 domain-containing protein Rv0540 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv1775 (family_assigned) — hypothetical protein Rv1775 Rv2708c (family_assigned) — hypothetical protein Rv2708c Rv0007 (dark) — DUF3566 domain-containing protein Rv0007 Rv2520c (dark) — DUF3618 domain-containing protein Rv2520c mce4D (family_assigned) — virulence factor Mce family protein mce4D

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.