MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3834c · 46 genes shown · anchor cysS1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
serS (requalified) — serine--tRNA ligase serS cysS1 (requalified) — cysteine--tRNA ligase cysS1 Rv3835 (family_assigned) — septum formation family protein Rv3835 Rv2133c (family_assigned) — SCO1664 family protein Rv2133c Rv3836 (family_assigned) — metallopeptidase family protein Rv3836 valS (requalified) — valine--tRNA ligase valS yidD (requalified) — membrane protein insertion efficiency factor YidD yidD glyS (requalified) — glycine--tRNA ligase glyS thrS (requalified) — threonine--tRNA ligase thrS atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH lysS (requalified) — lysine--tRNA ligase lysS pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks12 (requalified) — type I polyketide synthase pks12 rlmB (requalified) — 23S rRNA (guanosine(2251)-2'-O)-methyltransferase rlmB cysE (requalified) — serine O-acetyltransferase cysE ispF (requalified) — 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate syn ispF ispD (requalified) — 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans ispD carD (requalified) — RNA polymerase-binding transcription factor CarD carD Rv3909 (dark) — hypothetical protein Rv3909 Rv2843 (family_assigned) — hypothetical protein Rv2843 Rv2164c (family_assigned) — hypothetical protein Rv2164c Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 Rv2134c (dark) — hypothetical protein Rv2134c Rv2135c (family_assigned) — histidine phosphatase family protein Rv2135c helZ (requalified) — DEAD/DEAH box helicase helZ TB22.2 (family_assigned) — RsiV family protein TB22.2 PE23 (family_assigned) — PE family protein PE23 PE23 PE_PGRS62 (family_assigned) — PE-PGRS family protein PE_PGRS62 PE_PGRS62 folC (requalified) — bifunctional tetrahydrofolate synthase/dihydrofola folC Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c ileS (requalified) — isoleucine--tRNA ligase ileS ndkA (requalified) — nucleoside-diphosphate kinase ndkA leuS (requalified) — leucine--tRNA ligase leuS guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA rnpA (requalified) — ribonuclease P protein component rnpA yidC (requalified) — membrane protein insertase YidC yidC Rv3920c (family_assigned) — R3H domain-containing nucleic acid-binding protein Rv3920c rpmH (requalified) — 50S ribosomal protein L34 rpmH rho (requalified) — transcription termination factor Rho rho rplB (requalified) — 50S ribosomal protein L2 rplB htpG (requalified) — molecular chaperone HtpG htpG ppa (requalified) — inorganic diphosphatase ppa Rv1515c (family_assigned) — methyltransferase domain-containing protein Rv1515c zur (requalified) — zinc uptake transcriptional repressor Zur zur infB (requalified) — translation initiation factor IF-2 infB rplO (requalified) — 50S ribosomal protein L15 rplO

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.