MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3823c · 46 genes shown · anchor papA1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
mmpL8 (requalified) — sulfolipid-1 RND transporter MmpL8 mmpL8 papA1 (requalified) — acyltransferase PapA1 papA1 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mmpL10 (requalified) — RND transporter MmpL10 mmpL10 Rv1598c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1598c Rv1303 (family_assigned) — ATP synthase subunit I Rv1303 Rv1145 (requalified) — transmembrane transport protein Rv1145 papA3 (requalified) — acyltransferase PapA3 papA3 Rv0523c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv0523c fadD23 (requalified) — long-chain-fatty-acid--CoA ligase FadD23 fadD23 papA2 (requalified) — trehalose-2-sulfate acyltransferase papA2 mmpL7 (requalified) — phthiocerol dimycocerosate RND transporter MmpL7 mmpL7 ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 mas (requalified) — mycocerosate synthase mas pks12 (requalified) — type I polyketide synthase pks12 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC fas (requalified) — fatty acid synthase fas fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD mbtB (requalified) — phenyloxazoline synthase MbtB mbtB pks4 (requalified) — polyketide beta-ketoacyl synthase pks4 chp2 (requalified) — diacyltrehalose acyltransferase Chp2 chp2 Rv3492c (requalified) — Mce associated protein Rv3492c pks3 (requalified) — polyketide beta-ketoacyl synthase pks3 mmpL5 (requalified) — siderophore RND transporter MmpL5 mmpL5 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 mmpL9 (requalified) — RND transporter MmpL9 mmpL9 mmpL2 (requalified) — RND transporter MmpL2 mmpL2 mmpL4 (requalified) — transmembrane transport protein MmpL4 mmpL4 mmpL1 (requalified) — RND transporter MmpL1 mmpL1 atpB (family_assigned) — F0F1 ATP synthase subunit A atpB atpE (family_assigned) — F0F1 ATP synthase subunit C atpE atpF (family_assigned) — F0F1 ATP synthase subunit B atpF atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA Rv1146 (requalified) — transmembrane transport protein Rv1146 rslA (requalified) — anti-sigma-L factor RslA rslA mmpL6 (requalified) — transmembrane transport protein MmpL6 mmpL6 Rv1147 (family_assigned) — methyltransferase domain-containing protein Rv1147 hemL (requalified) — glutamate-1-semialdehyde 2%2C1-aminomutase hemL Rv0525 (family_assigned) — histidine phosphatase family protein Rv0525 Rv0756c (family_assigned) — hypothetical protein Rv0756c Rv2560 (family_assigned) — DUF2189 domain-containing protein Rv2560 ccdA (requalified) — cytochrome C-type biogenesis protein CcdA ccdA Rv0526 (requalified) — thioredoxin Rv0526

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.