MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3812 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE_PGRS62 (family_assigned) — PE-PGRS family protein PE_PGRS62 PE_PGRS62 Rv2133c (family_assigned) — SCO1664 family protein Rv2133c alaS (requalified) — alanine--tRNA ligase alaS helZ (requalified) — DEAD/DEAH box helicase helZ Rv1691 (family_assigned) — hypothetical protein Rv1691 Rv2267c (requalified) — sulfotransferase Rv2267c Rv3529c (requalified) — TLR2-mediated response inhibitor Rv3529c rplF (requalified) — 50S ribosomal protein L6 rplF rpmD (requalified) — 50S ribosomal protein L30 rpmD rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA Rv0492c (family_assigned) — GMC family oxidoreductase Rv0492c choD (requalified) — cholesterol oxidase choD Rv1279 (family_assigned) — GMC family oxidoreductase N-terminal domain-contai Rv1279 Rv2134c (dark) — hypothetical protein Rv2134c Rv2135c (family_assigned) — histidine phosphatase family protein Rv2135c TB22.2 (family_assigned) — RsiV family protein TB22.2 PE23 (family_assigned) — PE family protein PE23 PE23 ruvX (requalified) — Holliday junction resolvase RuvX ruvX mltG (requalified) — endolytic transglycosylase MltG mltG aroE (requalified) — shikimate dehydrogenase aroE Rv2102 (family_assigned) — hypothetical protein Rv2102 rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC Rv1692 (family_assigned) — HAD-IIA family hydrolase Rv1692 htpG (requalified) — molecular chaperone HtpG htpG ppnK (requalified) — NAD kinase ppnK tlyA (requalified) — 16S/23S rRNA (cytidine-2'-O)-methyltransferase Tly tlyA Rv1693 (dark) — hypothetical protein Rv1693 cyp128 (requalified) — cytochrome P450 cyp128 mftF (requalified) — mycofactocin biosynthesis glycosyltransferase MftF mftF Rv3530c (family_assigned) — SDR family oxidoreductase Rv3530c Rv3531c (family_assigned) — hypothetical protein Rv3531c rpsD (requalified) — 30S ribosomal protein S4 rpsD rplW (requalified) — 50S ribosomal protein L23 rplW rpsG (requalified) — 30S ribosomal protein S7 rpsG rplS (requalified) — 50S ribosomal protein L19 rplS rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 rplB (requalified) — 50S ribosomal protein L2 rplB rpsF (requalified) — 30S ribosomal protein S6 rpsF rplP (requalified) — 50S ribosomal protein L16 rplP rpsS (requalified) — 30S ribosomal protein S19 rpsS sigA (requalified) — RNA polymerase sigma factor sigA rpsM (requalified) — 30S ribosomal protein S13 rpsM rpsH (requalified) — 30S ribosomal protein S8 rpsH Rv0493c (family_assigned) — hypothetical protein Rv0493c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.