MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3807c · 46 genes shown · anchor ubiA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3807c (requalified) — decaprenylphosphoryl-5-phosphoribose phosphatase Rv3807c ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB glfT2 (requalified) — galactofuranosyl transferase GlfT2 glfT2 glf (requalified) — UDP-galactopyranose mutase glf rplF (requalified) — 50S ribosomal protein L6 rplF lprE (family_assigned) — LppP/LprE family lipoprotein lprE pirG (requalified) — exported repetitive protein pirG fadD32 (requalified) — long-chain-fatty-acid--AMP ligase FadD32 fadD32 Rv1683 (requalified) — acyl-CoA synthetase Rv1683 dprE1 (requalified) — decaprenylphospho-beta-D-ribofuranose 2-dehydrogen dprE1 cyp121 (requalified) — mycocyclosin synthase Cyp121 cyp121 cyp126 (requalified) — cytochrome P450 cyp126 lgt (requalified) — prolipoprotein diacylglyceryl transferase lgt aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC fbpA (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpA Rv3802c (requalified) — phospholipase Rv3802c glfT1 (requalified) — galactofuranosyl transferase GlfT glfT1 Rv1836c (family_assigned) — substrate-binding domain-containing protein Rv1836c galE2 (family_assigned) — SDR family oxidoreductase galE2 galE1 (requalified) — UDP-glucose 4-epimerase galE1 Rv3468c (requalified) — dTDP-glucose 4,6-dehydratase Rv3468c galTa (family_assigned) — Probable galactose-1-phosphate uridylyltransferase galTa rpsD (requalified) — 30S ribosomal protein S4 rpsD rplW (requalified) — 50S ribosomal protein L23 rplW rpsG (requalified) — 30S ribosomal protein S7 rpsG rplS (requalified) — 50S ribosomal protein L19 rplS rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 rplB (requalified) — 50S ribosomal protein L2 rplB dut (requalified) — deoxyuridine 5'-triphosphate nucleotidohydrolase dut Rv2529 (family_assigned) — hypothetical protein Rv2529 Rv1251c (family_assigned) — TM0106 family RecB-like putative nuclease Rv1251c polA (requalified) — DNA polymerase I polA deaD (requalified) — DEAD/DEAH box helicase deaD Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c Rv0312 (family_assigned) — Hsp70 family protein Rv0312 fbpC (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpC ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA Rv1158c (dark) — hypothetical protein Rv1158c mtc28 (family_assigned) — LpqN/LpqT family lipoprotein mtc28 pks13 (requalified) — polyketide synthase Pks13 pks13 accD4 (family_assigned) — acyl-CoA carboxylase subunit beta accD4 mbtE (requalified) — peptide synthetase mbtE mbtF (requalified) — peptide synthetase mbtF efpA (requalified) — multidrug efflux MFS transporter EfpA efpA Rv1684 (family_assigned) — Trm112 family protein Rv1684

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.