MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3796 · 25 genes shown · anchor embB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3796 (family_assigned) — hypothetical protein Rv3796 embB (requalified) — arabinosyltransferase EmbB embB embA (requalified) — arabinosyltransferase EmbA embA fadE35 (requalified) — DNA alkylation response protein fadE35 rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC dprE2 (requalified) — decaprenylphosphoryl-D-2-keto erythropentose reduc dprE2 dprE1 (requalified) — decaprenylphospho-beta-D-ribofuranose 2-dehydrogen dprE1 embC (requalified) — arabinosyltransferase EmbC embC aftA (requalified) — galactan 5-O-arabinofuranosyltransferase aftA acpM (requalified) — meromycolate extension acyl carrier protein AcpM acpM aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC Rv3789 (requalified) — arabinogalactan biosynthesis protein Rv3789 fadB (requalified) — fatty oxidation protein FadB fadB fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA fadE18 (family_assigned) — acyl-CoA dehydrogenase family protein fadE18 fadE17 (requalified) — acyl-CoA dehydrogenase fadE17 echA15 (family_assigned) — enoyl-CoA hydratase/isomerase family protein echA15 rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB whiB7 (family_assigned) — transcriptional regulator WhiB7 whiB7 sigA (requalified) — RNA polymerase sigma factor sigA sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.