MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3790 · 37 genes shown · anchor dprE2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
dprE1 (requalified) — decaprenylphospho-beta-D-ribofuranose 2-dehydrogen dprE1 dprE2 (requalified) — decaprenylphosphoryl-D-2-keto erythropentose reduc dprE2 Rv3789 (requalified) — arabinogalactan biosynthesis protein Rv3789 embC (requalified) — arabinosyltransferase EmbC embC aftA (requalified) — galactan 5-O-arabinofuranosyltransferase aftA ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA embA (requalified) — arabinosyltransferase EmbA embA embB (requalified) — arabinosyltransferase EmbB embB Rv2073c (family_assigned) — SDR family NAD(P)-dependent oxidoreductase Rv2073c Rv3788 (family_assigned) — GreA/GreB family elongation factor Rv3788 Rv3807c (requalified) — decaprenylphosphoryl-5-phosphoribose phosphatase Rv3807c plsB2 (requalified) — glycerol-3-phosphate 1-O-acyltransferase plsB2 plsB1 (requalified) — lysophospholipid acyltransferase plsB1 acpM (requalified) — meromycolate extension acyl carrier protein AcpM acpM aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB glfT2 (requalified) — galactofuranosyl transferase GlfT2 glfT2 glf (requalified) — UDP-galactopyranose mutase glf lgt (requalified) — prolipoprotein diacylglyceryl transferase lgt aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC cobL (requalified) — bifunctional cobalt-precorrin-7 (C(5))-methyltrans cobL cobK (requalified) — cobalt-precorrin-6A reductase cobK cobM (requalified) — precorrin-4 C(11)-methyltransferase cobM Rv2074 (requalified) — F420-dependent biliverdin reductase Rv2074 rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R rplF (requalified) — 50S ribosomal protein L6 rplF lprE (family_assigned) — LppP/LprE family lipoprotein lprE plsC (family_assigned) — HAD-IB family hydrolase plsC Rv2484c (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv2484c Rv2182c (family_assigned) — lysophospholipid acyltransferase family protein Rv2182c gpdA1 (requalified) — NAD(P)H-dependent glycerol-3-phosphate dehydrogena gpdA1 gpdA2 (requalified) — NAD(P)H-dependent glycerol-3-phosphate dehydrogena gpdA2 fadD11 (requalified) — fatty-acid--CoA ligase FadD11 fadD11 glpD2 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.