MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3778c · 43 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3778c (family_assigned) — cysteine desulfurase-like protein Rv3778c Rv1465 (family_assigned) — SUF system NifU family Fe-S cluster assembly prote Rv1465 sufC (requalified) — Fe-S cluster assembly ATPase SufC sufC sufD (requalified) — Fe-S cluster assembly protein SufD sufD sufB (requalified) — intein-containing Fe-S cluster assembly protein Su sufB spmT (requalified) — sphingomyelinase spmT rfbD (family_assigned) — ABC transporter permease rfbD Rv3284 (family_assigned) — SufE family protein Rv3284 bpa (requalified) — proteasome activator protein Bpa bpa glfT1 (requalified) — galactofuranosyl transferase GlfT glfT1 rfbE (family_assigned) — ABC transporter ATP-binding protein rfbE Rv3779 (family_assigned) — DUF6541 family protein Rv3779 Rv2360c (family_assigned) — hypothetical protein Rv2360c csd (requalified) — cysteine desulfurase csd iscS (family_assigned) — cysteine desulfurase family protein iscS Rv1466 (requalified) — metal-sulfur cluster assembly factor Rv1466 sufR (family_assigned) — suf operon transcriptional regulator SufR sufR ctpD (requalified) — cobalt-translocating P-type ATPase CtpD ctpD Rv0312 (family_assigned) — Hsp70 family protein Rv0312 egtE (requalified) — ergothioneine biosynthesis PLP-dependent enzyme Eg egtE Rv3403c (family_assigned) — FAD/NAD(P)-binding protein Rv3403c glf (requalified) — UDP-galactopyranose mutase glf pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB sseA (requalified) — sulfurtransferase sseA Rv3282 (requalified) — nucleoside triphosphate pyrophosphatase Rv3282 accD5 (family_assigned) — acyl-CoA carboxylase subunit beta accD5 accE5 (family_assigned) — acyl-CoA carboxylase subunit epsilon accE5 accA3 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA3 prcA (family_assigned) — proteasome subunit alpha prcA mpa (requalified) — proteasome ATPase mpa prcB (family_assigned) — proteasome subunit beta prcB glfT2 (requalified) — galactofuranosyl transferase GlfT2 glfT2 wbbL1 (requalified) — N-acetylglucosaminyl-diphospho-decaprenol L-rhamno wbbL1 Rv3242c (family_assigned) — ComF family protein Rv3242c xerC (requalified) — tyrosine recombinase XerC xerC Rv3632 (family_assigned) — DUF2304 domain-containing protein Rv3632 Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c Rv2361c (requalified) — decaprenyl diphosphate synthase Rv2361c recO (requalified) — DNA repair protein RecO recO amiA2 (requalified) — amidase amiA2 Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv0497 (family_assigned) — hypothetical protein Rv0497

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.