MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3773c · 46 genes shown · anchor echA21 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3773c (family_assigned) — TIGR03086 family metal-binding protein Rv3773c echA21 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA21 Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c rslA (requalified) — anti-sigma-L factor RslA rslA Rv3779 (family_assigned) — DUF6541 family protein Rv3779 lipE (requalified) — lipase LipE lipE Rv3435c (family_assigned) — DUF4436 domain-containing protein Rv3435c Rv3481c (family_assigned) — GAP family protein Rv3481c Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 adnA (requalified) — ATP-dependent DNA helicase AdnA adnA Rv0738 (family_assigned) — TIGR03086 family metal-binding protein Rv0738 Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv1353c (family_assigned) — TetR/AcrR family transcriptional regulator C-termi Rv1353c fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 Rv1171 (family_assigned) — hypothetical protein Rv1171 Rv0875c (dark) — DUF2771 domain-containing protein Rv0875c Rv0188 (requalified) — SPW repeat protein Rv0188 sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL Rv1145 (requalified) — transmembrane transport protein Rv1145 Rv0737 (family_assigned) — MarR family transcriptional regulator Rv0737 Rv1138c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv1138c pks10 (requalified) — type III polyketide synthase pks10 Rv1146 (requalified) — transmembrane transport protein Rv1146 rfbE (family_assigned) — ABC transporter ATP-binding protein rfbE bpa (requalified) — proteasome activator protein Bpa bpa rfbD (family_assigned) — ABC transporter permease rfbD glfT1 (requalified) — galactofuranosyl transferase GlfT glfT1 Rv3632 (family_assigned) — DUF2304 domain-containing protein Rv3632 Rv1780 (family_assigned) — hypothetical protein Rv1780 Rv0293c (requalified) — alpha/beta fold hydrolase Rv0293c Rv2285 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv2285 Rv3480c (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv3480c Rv3434c (family_assigned) — rhomboid-like protein Rv3434c Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c Rv3166c (family_assigned) — DUF4129 domain-containing protein Rv3166c Rv3843c (family_assigned) — DUF4328 domain-containing protein Rv3843c Rv2067c (requalified) — class I SAM-dependent methyltransferase Rv2067c Rv1635c (family_assigned) — glycosyltransferase family 39 protein Rv1635c Rv2558 (family_assigned) — hypothetical protein Rv2558 cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ Rv3899c (family_assigned) — hypothetical protein Rv3899c Rv2079 (family_assigned) — alpha/beta hydrolase Rv2079

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.