MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3769 · 46 genes shown · anchor fas · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3769 (family_assigned) — hypothetical protein Rv3769 scpA (requalified) — segregation/condensation protein A scpA gyrB (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit B gyrB fas (requalified) — fatty acid synthase fas Rv3768 (family_assigned) — nuclear transport factor 2 family protein Rv3768 Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 Rv3899c (family_assigned) — hypothetical protein Rv3899c topA (requalified) — type I DNA topoisomerase topA polA (requalified) — DNA polymerase I polA Rv2529 (family_assigned) — hypothetical protein Rv2529 scpB (family_assigned) — SMC-Scp complex subunit ScpB scpB Rv1708 (requalified) — initiation inhibitor protein Rv1708 cmk (requalified) — (d)CMP kinase cmk smc (requalified) — chromosome segregation protein SMC smc Rv1711 (requalified) — pseudouridine synthase Rv1711 engA (requalified) — ribosome biogenesis GTPase Der engA gyrA (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit A gyrA mfpA (requalified) — pentapeptide repeat protein MfpA mfpA Rv0730 (requalified) — GCN5-like N-acetyltransferase Rv0730 recF (requalified) — DNA replication/repair protein RecF recF dnaN (family_assigned) — DNA polymerase III subunit beta dnaN Rv0004 (requalified) — DNA replication protein DciA Rv0004 pks7 (requalified) — type I polyketide synthase pks7 pks17 (requalified) — polyketide synthase pks17 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mas (requalified) — mycocerosate synthase mas accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 pks6 (requalified) — membrane bound polyketide synthase pks6 Rv1060 (family_assigned) — SRPBCC family protein Rv1060 Rv2561 (family_assigned) — Conserved hypothetical protein Rv2561 Rv3767c (requalified) — class I SAM-dependent methyltransferase Rv3767c eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 Rv2086 (family_assigned) — hypothetical protein Rv2086 PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 Rv2083 (dark) — hypothetical protein Rv2083 Rv2305 (family_assigned) — hypothetical protein Rv2305 Rv2084 (dark) — hypothetical protein Rv2084 eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 Rv3900c (family_assigned) — hypothetical protein Rv3900c Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 Rv1278 (family_assigned) — AAA family ATPase Rv1278 recA (requalified) — intein-containing recombinase RecA recA Rv1277 (family_assigned) — hypothetical protein Rv1277 Rv2090 (requalified) — 5'-3' exonuclease Rv2090

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.