MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3765c · 38 genes shown · anchor tcrY · open gene page → · ← back to 1 hop

Evidence: Min score 0
tcrX (requalified) — two-component system response regulator TcrX tcrX tcrY (requalified) — two component sensor kinase TcrY tcrY trcS (family_assigned) — HAMP domain-containing sensor histidine kinase trcS Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c prrB (requalified) — two-component system sensor histidine kinase PrrB prrB phoR (requalified) — sensory box histidine kinase PhoR phoR mprB (requalified) — two-component system sensor histidine kinase MprB mprB senX3 (requalified) — two-component system sensor histidine kinase SenX3 senX3 mtrB (requalified) — two-component system sensor histidine kinase MtrB mtrB Rv0601c (requalified) — two component sensor kinase HK2 Rv0601c Rv2998A (family_assigned) — Conserved hypothetical protein Rv2998A Rv3365c (requalified) — sensor histidine kinase Rv3365c Rv3645 (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv3645 trcR (requalified) — two-component system response regulator TrcR trcR regX3 (requalified) — two component sensory transduction protein RegX regX3 prrA (requalified) — two-component system response regulator PrrA prrA phoP (requalified) — two-component system response regulator PhoP phoP mtrA (requalified) — two-component system response regulator MtrA mtrA kdpE (requalified) — two-component system response regulator KdpE kdpE tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA mprA (requalified) — two-component system response regulator MprA mprA pepD (requalified) — serine protease PepD pepD lpqB (requalified) — MtrAB system accessory lipoprotein LpqB lpqB Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB Rv1734c (family_assigned) — hypothetical protein Rv1734c dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT bkdC (family_assigned) — dihydrolipoamide acetyltransferase family protein bkdC Rv3363c (family_assigned) — DUF742 domain-containing protein Rv3363c Rv3362c (family_assigned) — ATP/GTP-binding protein Rv3362c Rv3364c (requalified) — serine protease inhibitor Rv3364c mfpA (requalified) — pentapeptide repeat protein MfpA mfpA cpdA (requalified) — 3'%2C5'-cyclic adenosine monophosphate phosphodies cpdA ndkA (requalified) — nucleoside-diphosphate kinase ndkA pykA (requalified) — pyruvate kinase pykA relA (family_assigned) — RelA/SpoT family protein relA ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.