MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3760 · 46 genes shown · anchor proV · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3760 (family_assigned) — membrane protein Rv3760 proV (family_assigned) — glycine betaine/L-proline ABC transporter ATP-bind proV proX (family_assigned) — glycine betaine/carnitine/choline/L-proline ABC tr proX proZ (family_assigned) — glycine betaine/carnitine/choline/L-proline ABC tr proZ proW (family_assigned) — glycine betaine/carnitine/choline/L-proline ABC tr proW Rv3755c (family_assigned) — putative glycolipid-binding domain-containing prot Rv3755c Rv2216 (family_assigned) — TIGR01777 family oxidoreductase Rv2216 Rv1225c (family_assigned) — HAD-IIA family hydrolase Rv1225c Rv1692 (family_assigned) — HAD-IIA family hydrolase Rv1692 rip (requalified) — zinc metalloprotease Rip rip Rv1624c (family_assigned) — HdeD family acid-resistance protein Rv1624c Rv3479 (requalified) — transmembrane protein Rv3479 pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP lpqZ (family_assigned) — glycine betaine ABC transporter substrate-binding lpqZ lppM (requalified) — lipoprotein LppM lppM dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT lipB (requalified) — lipoyl(octanoyl) transferase LipB lipB lipA (requalified) — lipoyl synthase lipA Rv2219 (family_assigned) — DUF4191 domain-containing protein Rv2219 arcA (requalified) — arginine deiminase arcA ephD (family_assigned) — SDR family oxidoreductase ephD Rv1226c (family_assigned) — PH domain-containing protein Rv1226c Rv1227c (family_assigned) — PH domain-containing protein Rv1227c cmk (requalified) — (d)CMP kinase cmk rsmD (requalified) — 16S rRNA (guanine(966)-N(2))-methyltransferase Rsm rsmD Rv1691 (family_assigned) — hypothetical protein Rv1691 glpK (requalified) — glycerol kinase GlpK glpK plsB1 (requalified) — lysophospholipid acyltransferase plsB1 plsB2 (requalified) — glycerol-3-phosphate 1-O-acyltransferase plsB2 adhC (requalified) — NAD(P)-dependent alcohol dehydrogenase adhC ppnK (requalified) — NAD kinase ppnK dxr (requalified) — 1-deoxy-D-xylulose-5-phosphate reductoisomerase dxr gcpE (requalified) — flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-e gcpE Rv2867c (family_assigned) — GNAT family N-acetyltransferase Rv2867c cdsA (requalified) — phosphatidate cytidylyltransferase cdsA mpt83 (requalified) — cell surface glycolipoprotein Mpt83 mpt83 Rv2361c (requalified) — decaprenyl diphosphate synthase Rv2361c cya (requalified) — adenylate cyclase cya cydA (family_assigned) — cytochrome D ubiquinol oxidase subunit I CydA cydA cydB (family_assigned) — cytochrome d ubiquinol oxidase subunit II cydB cydD (family_assigned) — cytochrome biosyntheisis ABC transporter ATP-bindi cydD cydC (family_assigned) — thiol reductant ABC exporter subunit CydC cydC mgtC (family_assigned) — MgtC/SapB family protein mgtC Rv1947 (family_assigned) — hypothetical protein Rv1947 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 Rv0470A (family_assigned) — hypothetical protein Rv0470A

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.