MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3758c · 46 genes shown · anchor proZ · open gene page → · ← back to 1 hop

Evidence: Min score 0
proV (family_assigned) — glycine betaine/L-proline ABC transporter ATP-bind proV proZ (family_assigned) — glycine betaine/carnitine/choline/L-proline ABC tr proZ proW (family_assigned) — glycine betaine/carnitine/choline/L-proline ABC tr proW proX (family_assigned) — glycine betaine/carnitine/choline/L-proline ABC tr proX lpqZ (family_assigned) — glycine betaine ABC transporter substrate-binding lpqZ Rv3755c (family_assigned) — putative glycolipid-binding domain-containing prot Rv3755c Rv3760 (family_assigned) — membrane protein Rv3760 drrA (family_assigned) — daunorubicin ABC transporter ATP-binding protein D drrA trpS (requalified) — tryptophan--tRNA ligase trpS Rv2688c (family_assigned) — ABC transporter ATP-binding protein Rv2688c Rv0204c (family_assigned) — TIGR00374 family protein Rv0204c Rv0585c (family_assigned) — lysylphosphatidylglycerol synthase transmembrane d Rv0585c accD1 (family_assigned) — acetyl-/propionyl-CoA carboxylase subunit beta accD1 Rv1234 (requalified) — general stress protein Rv1234 mdh (requalified) — malate dehydrogenase mdh lppM (requalified) — lipoprotein LppM lppM Rv2216 (family_assigned) — TIGR01777 family oxidoreductase Rv2216 drrB (family_assigned) — daunorubicin ABC transporter permease DrrB drrB drrC (family_assigned) — ABC transporter permease drrC ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD papA5 (requalified) — phthiocerol/phthiodiolone dimycocerosyl transferas papA5 yhjD (requalified) — inner membrane protein YhjD yhjD pmmB (requalified) — phospho-sugar mutase pmmB Rv3338 (family_assigned) — Conserved hypothetical protein Rv3338 Rv3337 (family_assigned) — Conserved hypothetical protein Rv3337 pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT serS (requalified) — serine--tRNA ligase serS Rv2686c (family_assigned) — fluoroquinolones efflux ABC transporter permease Rv2686c Rv2687c (family_assigned) — fluoroquinolone transporter permease Rv2687c Rv1272c (family_assigned) — fatty acid ABC transporter ATP-binding protein/per Rv1272c irtB (family_assigned) — iron ABC transporter ATP-binding protein/permease irtB irtA (family_assigned) — iron ABC transporter ATP-binding protein/permease irtA Rv0194 (family_assigned) — ABC transporter ATP-binding protein Rv0194 Rv0205 (family_assigned) — AI-2E family transporter Rv0205 Rv0128 (family_assigned) — YoaK family protein Rv0128 Rv0955 (family_assigned) — DUF6350 family protein Rv0955 aftD (family_assigned) — DUF3367 domain-containing protein aftD Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 rsmA (requalified) — anti-sigma-M factor RsmA rsmA mce2C (family_assigned) — virulence factor Mce family protein mce2C mce2F (family_assigned) — MlaD family protein mce2F mce2D (family_assigned) — virulence factor Mce family protein mce2D Rv0479c (family_assigned) — DUF2993 domain-containing protein Rv0479c mce2R (family_assigned) — FadR family transcriptional regulator Mce2R mce2R

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.