MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3757c · 46 genes shown · anchor proV · open gene page → · ← back to 1 hop

Evidence: Min score 0
proW (family_assigned) — glycine betaine/carnitine/choline/L-proline ABC tr proW proV (family_assigned) — glycine betaine/L-proline ABC transporter ATP-bind proV proX (family_assigned) — glycine betaine/carnitine/choline/L-proline ABC tr proX proZ (family_assigned) — glycine betaine/carnitine/choline/L-proline ABC tr proZ Rv3755c (family_assigned) — putative glycolipid-binding domain-containing prot Rv3755c lpqZ (family_assigned) — glycine betaine ABC transporter substrate-binding lpqZ Rv3760 (family_assigned) — membrane protein Rv3760 accD1 (family_assigned) — acetyl-/propionyl-CoA carboxylase subunit beta accD1 hsaF (requalified) — 4-hydroxy-2-oxovalerate aldolase hsaF sirA (requalified) — sulfite reductase sirA atpB (family_assigned) — F0F1 ATP synthase subunit A atpB cobL (requalified) — bifunctional cobalt-precorrin-7 (C(5))-methyltrans cobL Rv2571c (family_assigned) — aromatic acid exporter family protein Rv2571c lppM (requalified) — lipoprotein LppM lppM Rv1234 (requalified) — general stress protein Rv1234 mdh (requalified) — malate dehydrogenase mdh Rv2216 (family_assigned) — TIGR01777 family oxidoreductase Rv2216 accA1 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA1 scoB (family_assigned) — succinyl-CoA--3-ketoacid CoA transferase subunit B scoB Rv2499c (family_assigned) — MaoC family dehydratase Rv2499c fadE19 (family_assigned) — acyl-CoA dehydrogenase family protein fadE19 scoA (family_assigned) — succinyl-CoA--3-ketoacid CoA transferase subunit A scoA fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13 hsaG (requalified) — acetaldehyde dehydrogenase (acetylating) hsaG hsaE (requalified) — 2-keto-4-pentenoate hydratase hsaE mhpE (requalified) — 4-hydroxy-2-oxovalerate aldolase mhpE Rv3538 (requalified) — dehydrogenase Rv3538 kstD (requalified) — 3-oxosteroid 1-dehydrogenase kstD leuB (requalified) — 3-isopropylmalate dehydrogenase leuB cysH (requalified) — phosphoadenylyl-sulfate reductase cysH cysC (requalified) — adenylyl-sulfate kinase cysC che1 (requalified) — ferrochelatase che1 cysK1 (requalified) — O-acetylserine sulfhydrylase cysK1 Rv3684 (requalified) — lyase Rv3684 metB (requalified) — cystathionine gamma-synthase metB atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH atpC (family_assigned) — F0F1 ATP synthase subunit epsilon atpC atpE (family_assigned) — F0F1 ATP synthase subunit C atpE atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ cobK (requalified) — cobalt-precorrin-6A reductase cobK cobH (requalified) — precorrin-8X methylmutase cobH cobM (requalified) — precorrin-4 C(11)-methyltransferase cobM Rv2073c (family_assigned) — SDR family NAD(P)-dependent oxidoreductase Rv2073c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.