MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3743c · 45 genes shown · anchor nmtR · open gene page → · ← back to 1 hop

Evidence: Min score 0
ctpJ (requalified) — heavy metal translocating P-type ATPase ctpJ nmtR (requalified) — Ni(II)/Co(II)-sensing metalloregulatory transcript nmtR Rv3742c (requalified) — oxidoreductase Rv3742c Rv3741c (requalified) — oxidoreductase Rv3741c sodC (family_assigned) — superoxide dismutase family protein sodC Rv3740c (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv3740c mmcO (requalified) — multicopper oxidase MmcO mmcO Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c kmtR (requalified) — Ni(II)/Co(II)-sensing metalloregulatory transcript kmtR ctpH (requalified) — cation-translocating P-type ATPase ctpH ctpC (requalified) — manganese-exporting P-type ATPase CtpC ctpC Rv2025c (family_assigned) — cation diffusion facilitator family transporter Rv2025c Rv0894 (family_assigned) — hypothetical protein Rv0894 Rv1359 (family_assigned) — transcriptional regulator Rv1359 ctpD (requalified) — cobalt-translocating P-type ATPase CtpD ctpD zur (requalified) — zinc uptake transcriptional repressor Zur zur Rv0081 (family_assigned) — lsr2/espR transcriptional regulator Rv0081 Rv1393c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv1393c Rv0892 (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv0892 Rv3049c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv3049c Rv2876 (requalified) — transmembrane protein Rv2876 qcrA (requalified) — hypothetical protein qcrA qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB Rv0433 (requalified) — glutamate--cysteine ligase Rv0433 ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC lipY (requalified) — triacylglycerol lipase Lip lipY Rv2252 (requalified) — diacylglycerol kinase Rv2252 acrA1 (family_assigned) — SDR family oxidoreductase acrA1 Rv1543 (family_assigned) — SDR family NAD(P)-dependent oxidoreductase Rv1543 hemZ (requalified) — ferrochelatase hemZ bfrA (requalified) — bacterioferritin BfrA bfrA Rv0849 (requalified) — MFS transporter Rv0849 bfrB (requalified) — ferritin BfrB bfrB cysK2 (requalified) — cysteine synthase CysK cysK2 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 embR (requalified) — response regulator transcription factor EmbR embR nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS Rv0377 (family_assigned) — LysR family transcriptional regulator Rv0377 virS (family_assigned) — AraC family transcriptional regulator virS Rv2851c (family_assigned) — GNAT family N-acetyltransferase Rv2851c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.