MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3736 · 44 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR embR (requalified) — response regulator transcription factor EmbR embR iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR cobB (requalified) — NAD-dependent protein deacylase cobB Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c Rv1930c (requalified) — glutamine amidotransferase Rv1930c sigI (requalified) — RNA polymerase sigma factor SigI sigI virS (family_assigned) — AraC family transcriptional regulator virS Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c lysE (requalified) — L-lysine exporter lysE Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv1359 (family_assigned) — transcriptional regulator Rv1359 tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA Rv2282c (family_assigned) — LysR family transcriptional regulator Rv2282c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c mftB (requalified) — mycofactocin biosynthesis chaperone MftB mftB mftC (requalified) — mycofactocin radical SAM maturase mftC Rv0690c (family_assigned) — DUF2332 domain-containing protein Rv0690c nadE (requalified) — NAD(+) synthase nadE ppnK (requalified) — NAD kinase ppnK pncB2 (requalified) — nicotinate phosphoribosyltransferase pncB2 pncB1 (requalified) — nicotinate phosphoribosyltransferase pncB1 cinA (requalified) — competence/damage-inducible protein A cinA Rv0894 (family_assigned) — hypothetical protein Rv0894 mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R Rv1776c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1776c moaR1 (family_assigned) — transcriptional regulator MoaR1 moaR1 Rv1152 (family_assigned) — GntR family transcriptional regulator Rv1152 pncA (requalified) — pyrazinamidase PncA pncA nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA Rv1724c (dark) — hypothetical protein Rv1724c Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.