MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3732 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3732 (dark) — DUF2330 domain-containing protein Rv3732 ptrp (family_assigned) — hypothetical protein ptrp embR (requalified) — response regulator transcription factor EmbR embR Rv2113 (family_assigned) — integral membrane protein Rv2113 Rv3254 (requalified) — oxidoreductase Rv3254 Rv1775 (family_assigned) — hypothetical protein Rv1775 vapB47 (requalified) — antitoxin VapB47 vapB47 mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R ureD (requalified) — urease accessory protein UreD ureD Rv3788 (family_assigned) — GreA/GreB family elongation factor Rv3788 ligC (requalified) — ATP-dependent DNA ligase ligC Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR Rv0539 (requalified) — dolichyl-phosphate sugar synthase Rv0539 Rv0540 (family_assigned) — DUF2064 domain-containing protein Rv0540 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv2164c (family_assigned) — hypothetical protein Rv2164c Rv3909 (dark) — hypothetical protein Rv3909 Rv0894 (family_assigned) — hypothetical protein Rv0894 Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv2114 (dark) — hypothetical protein Rv2114 erg3 (requalified) — membrane-bound C-5 sterol desaturase erg3 Rv1774 (requalified) — FAD-binding oxidoreductase Rv1774 Rv1773c (family_assigned) — IclR family transcriptional regulator Rv1773c vapC47 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC47 vapC35 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC35 vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 Rv3406 (requalified) — alpha-ketoglutarate-dependent sulfate ester dioxyg Rv3406 vapC8 (family_assigned) — PIN domain-containing protein vapC8 vapC1 (requalified) — type II toxin-antitoxin system ribonuclease VapC1 vapC1 Rv0452 (family_assigned) — TetR family transcriptional regulator Rv0452 Rv1931c (family_assigned) — transcriptional regulator Rv1931c nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c ureF (requalified) — urease accessory protein UreF ureF ureG (requalified) — urease accessory protein UreG ureG ureB (family_assigned) — urease subunit beta ureB ureA (family_assigned) — urease subunit gamma ureA ureC (family_assigned) — urease subunit alpha ureC rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ Rv3789 (requalified) — arabinogalactan biosynthesis protein Rv3789

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.