MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3721c · 39 genes shown · anchor adnA · open gene page → · ← back to 1 hop

Evidence: Min score 0
dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 dnaN (family_assigned) — DNA polymerase III subunit beta dnaN Rv2191 (family_assigned) — hypothetical protein Rv2191 dnaQ (family_assigned) — DEDDh family exonuclease dnaQ Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaE2 (requalified) — error-prone DNA polymerase dnaE2 lppK (family_assigned) — hypothetical protein lppK Rv2478c (family_assigned) — hypothetical protein Rv2478c ssb (family_assigned) — single-stranded DNA-binding protein ssb Rv3722c (requalified) — aminotransferase Rv3722c adnA (requalified) — ATP-dependent DNA helicase AdnA adnA polA (requalified) — DNA polymerase I polA dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA uvrB (family_assigned) — excinuclease ABC subunit UvrB uvrB Rv3394c (family_assigned) — DNA polymerase Y family protein Rv3394c Rv3395c (family_assigned) — hypothetical protein Rv3395c Rv2090 (requalified) — 5'-3' exonuclease Rv2090 helZ (requalified) — DEAD/DEAH box helicase helZ ligC (requalified) — ATP-dependent DNA ligase ligC ligB (requalified) — ATP-dependent DNA ligase ligB Rv2228c (requalified) — multifunctional RNASE H/alpha-ribazole phosphatase Rv2228c ettA (requalified) — energy-dependent translational throttle protein Et ettA priA (family_assigned) — primosomal protein N' priA rplI (requalified) — 50S ribosomal protein L9 rplI rpsF (requalified) — 30S ribosomal protein S6 rpsF rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 dnaB (requalified) — replicative DNA helicase dnaB Rv2230c (requalified) — Nif3-like dinuclear metal center hexameric protein Rv2230c lucA (requalified) — lipid uptake coordinator LucA lucA rmlB (requalified) — dTDP-glucose 4%2C6-dehydratase rmlB Rv3784 (requalified) — dTDP-glucose 4,6-dehydratase Rv3784 Rv1085c (family_assigned) — hemolysin III family protein Rv1085c adnB (requalified) — ATP-dependent DNA helicase AdnB adnB uvrD2 (requalified) — ATP-dependent DNA helicase UvrD2 uvrD2 nudC (requalified) — NAD(+) diphosphatase nudC radA (requalified) — DNA repair protein RadA radA Rv3200c (family_assigned) — potassium channel family protein Rv3200c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.