MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3717 · 46 genes shown · anchor recR · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3717 (family_assigned) — hypothetical protein Rv3717 Rv3915 (requalified) — peptidoglycan hydrolase Rv3915 Rv0063 (requalified) — FAD-binding oxidoreductase Rv0063 Rv3209 (family_assigned) — MmpS family transport accessory protein Rv3209 Rv3096 (requalified) — 1%2C4-beta-xylanase Rv3096 Rv3716c (family_assigned) — YbaB/EbfC family nucleoid-associated protein Rv3716c recR (requalified) — recombination mediator RecR recR ftsW (family_assigned) — putative lipid II flippase FtsW ftsW sigD (requalified) — ECF RNA polymerase sigma factor SigD sigD xerC (requalified) — tyrosine recombinase XerC xerC Rv1157c (dark) — hypothetical protein Rv1157c Rv0110 (family_assigned) — integral membrane protein Rv0110 Rv1337 (family_assigned) — rhomboid family intramembrane serine protease Rv1337 trxC (requalified) — thioredoxin trxC Rv0948c (requalified) — chorismate mutase Rv0948c murA (requalified) — UDP-N-acetylglucosamine 1-carboxyvinyltransferase murA Rv2179c (requalified) — polyadenylate-specific 3'-exoribonuclease AS Rv2179c trxB2 (requalified) — thioredoxin-disulfide reductase trxB2 hsr1 (requalified) — hypothetical protein hsr1 TB9.4 (family_assigned) — hypothetical protein TB9.4 Rv3095 (family_assigned) — helix-turn-helix domain-containing protein Rv3095 Rv3094c (family_assigned) — acyl-CoA dehydrogenase family protein Rv3094c Rv2120c (family_assigned) — glycine zipper 2TM domain-containing protein Rv2120c clpP2 (family_assigned) — ATP-dependent CLP protease proteolytic subunit Clp clpP2 Rv3714c (family_assigned) — hypothetical protein Rv3714c dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX rimP (requalified) — ribosome maturation factor RimP rimP recO (requalified) — DNA repair protein RecO recO espL (requalified) — type VII secretion system ESX-1 associated protein espL uvrD1 (requalified) — ATP-dependent DNA helicase UvrD uvrD1 murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG murC (requalified) — UDP-N-acetylmuramate--L-alanine ligase murC ftsQ (requalified) — cell division protein FtsQ ftsQ murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX murD (requalified) — UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase murD rsdA (requalified) — anti-sigma D factor RsdA rsdA Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c Rv3415c (family_assigned) — hypothetical protein Rv3415c ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA pirG (requalified) — exported repetitive protein pirG Rv3242c (family_assigned) — ComF family protein Rv3242c apt (requalified) — adenine phosphoribosyltransferase apt Rv2646 (requalified) — tyrosine-type recombinase/integrase Rv2646 viuB (requalified) — siderophore-interacting protein viuB tyrA (requalified) — prephenate dehydrogenase TyrA tyrA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.