MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3712 · 40 genes shown · anchor cobQ2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3712 (family_assigned) — Mur ligase family protein Rv3712 cobQ2 (requalified) — type 1 glutamine amidotransferase cobQ2 murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG dnaQ (family_assigned) — DEDDh family exonuclease dnaQ murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF murD (requalified) — UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase murD pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB rfe (requalified) — UDP-N-acetylglucosamine--decaprenyl-phosphate N-ac rfe murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX Rv2864c (family_assigned) — penicillin-binding protein Rv2864c pbpA (requalified) — D%2CD-transpeptidase PbpA pbpA ftsQ (requalified) — cell division protein FtsQ ftsQ murC (requalified) — UDP-N-acetylmuramate--L-alanine ligase murC murE (requalified) — UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-d murE dfp (requalified) — bifunctional phosphopantothenoylcysteine decarboxy dfp cobS (requalified) — adenosylcobinamide-GDP ribazoletransferase cobS ftsW (family_assigned) — putative lipid II flippase FtsW ftsW dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 dnaN (family_assigned) — DNA polymerase III subunit beta dnaN dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv2191 (family_assigned) — hypothetical protein Rv2191 ddlA (requalified) — D-alanine--D-alanine ligase DdlA ddlA Rv2164c (family_assigned) — hypothetical protein Rv2164c rsmH (requalified) — 16S rRNA (cytosine(1402)-N(4))-methyltransferase R rsmH wbbL1 (requalified) — N-acetylglucosaminyl-diphospho-decaprenol L-rhamno wbbL1 Rv1301 (requalified) — L-threonylcarbamoyladenylate synthase Rv1301 atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH hemK (requalified) — peptide chain release factor N(5)-glutamine methyl hemK prfA (requalified) — peptide chain release factor 1 prfA rpmE (requalified) — 50S ribosomal protein L31 rpmE ponA2 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA2 rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA Rv2091c (family_assigned) — DUF4333 domain-containing protein Rv2091c Rv2867c (family_assigned) — GNAT family N-acetyltransferase Rv2867c pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB pknA (requalified) — serine/threonine protein kinase PknA pknA Rv1024 (family_assigned) — septum formation initiator family protein Rv1024

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.