MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3711c · 44 genes shown · anchor cobQ2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
dnaQ (family_assigned) — DEDDh family exonuclease dnaQ dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 dnaN (family_assigned) — DNA polymerase III subunit beta dnaN dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv2191 (family_assigned) — hypothetical protein Rv2191 cobQ2 (requalified) — type 1 glutamine amidotransferase cobQ2 Rv3712 (family_assigned) — Mur ligase family protein Rv3712 rpmD (requalified) — 50S ribosomal protein L30 rpmD rplJ (requalified) — 50S ribosomal protein L10 rplJ rplB (requalified) — 50S ribosomal protein L2 rplB rplC (requalified) — 50S ribosomal protein L3 rplC polA (requalified) — DNA polymerase I polA dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA uvrB (family_assigned) — excinuclease ABC subunit UvrB uvrB murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG murE (requalified) — UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-d murE dfp (requalified) — bifunctional phosphopantothenoylcysteine decarboxy dfp cobS (requalified) — adenosylcobinamide-GDP ribazoletransferase cobS murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF murD (requalified) — UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase murD pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB rpsG (requalified) — 30S ribosomal protein S7 rpsG rpsD (requalified) — 30S ribosomal protein S4 rpsD rplW (requalified) — 50S ribosomal protein L23 rplW rpsF (requalified) — 30S ribosomal protein S6 rpsF rplP (requalified) — 50S ribosomal protein L16 rplP rpsS (requalified) — 30S ribosomal protein S19 rpsS rplL (requalified) — 50S ribosomal protein L7/L12 rplL rplK (requalified) — 50S ribosomal protein L11 rplK rplR (requalified) — 50S ribosomal protein L18 rplR rplM (requalified) — 50S ribosomal protein L13 rplM rpsO (requalified) — 30S ribosomal protein S15 rpsO rplE (requalified) — 50S ribosomal protein L5 rplE rpmJ (requalified) — 50S ribosomal protein L36 rpmJ rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rplX (requalified) — 50S ribosomal protein L24 rplX rpsE (requalified) — 30S ribosomal protein S5 rpsE rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2 rpmA (requalified) — 50S ribosomal protein L27 rpmA rpmE (requalified) — 50S ribosomal protein L31 rpmE rplF (requalified) — 50S ribosomal protein L6 rplF

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.