MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3708c · 46 genes shown · anchor ask · open gene page → · ← back to 1 hop

Evidence: Min score 0
asd (requalified) — aspartate-semialdehyde dehydrogenase asd ask (requalified) — aspartate kinase ask dapA (requalified) — 4-hydroxy-tetrahydrodipicolinate synthase dapA thrA (requalified) — homoserine dehydrogenase thrA dapF (requalified) — diaminopimelate epimerase dapF Rv3707c (requalified) — hypothetical protein Rv3707c dapB (requalified) — 4-hydroxy-tetrahydrodipicolinate reductase dapB leuA (requalified) — 2-isopropylmalate synthase leuA thrB (requalified) — homoserine kinase thrB lysA (requalified) — diaminopimelate decarboxylase lysA pgk (requalified) — phosphoglycerate kinase pgk thrC (requalified) — threonine synthase thrC rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC asnB (requalified) — asparagine synthase (glutamine-hydrolyzing) asnB purA (requalified) — adenylosuccinate synthase purA argG (requalified) — argininosuccinate synthase argG nadB (requalified) — L-aspartate oxidase nadB rnj (requalified) — ribonuclease J rnj thyX (requalified) — FAD-dependent thymidylate synthase thyX metA (requalified) — homoserine O-acetyltransferase metA dapE (requalified) — succinyl-diaminopimelate desuccinylase DapE dapE murE (requalified) — UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-d murE miaA (requalified) — tRNA (adenosine(37)-N6)-dimethylallyltransferase M miaA Rv2728c (family_assigned) — hypothetical protein Rv2728c hflX (family_assigned) — GTP-binding protein HflX hflX pirG (requalified) — exported repetitive protein pirG eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 lpqF (requalified) — serine hydrolase lpqF Rv2743c (family_assigned) — hypothetical protein Rv2743c dapD (requalified) — 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxyla dapD Rv2772c (family_assigned) — hypothetical protein Rv2772c Rv2771c (family_assigned) — flavodoxin family protein Rv2771c pcnA (requalified) — poly(A) polymerase PcnA pcnA hsaG (requalified) — acetaldehyde dehydrogenase (acetylating) hsaG leuC (family_assigned) — 3-isopropylmalate dehydratase large subunit leuC leuD (family_assigned) — 3-isopropylmalate dehydratase small subunit leuD ilvD (requalified) — dihydroxy-acid dehydratase ilvD ilvE (requalified) — branched-chain amino acid aminotransferase ilvE accA3 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA3 purM (requalified) — phosphoribosylformylglycinamidine cyclo-ligase purM sdaA (requalified) — L-serine ammonia-lyase sdaA metH (requalified) — methionine synthase metH argS (requalified) — arginine--tRNA ligase argS tpi (requalified) — triose-phosphate isomerase tpi gap (requalified) — type I glyceraldehyde-3-phosphate dehydrogenase gap eno (requalified) — phosphopyruvate hydratase eno

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.