MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3707c · 46 genes shown · anchor pirG · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3707c (requalified) — hypothetical protein Rv3707c pirG (requalified) — exported repetitive protein pirG eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 ask (requalified) — aspartate kinase ask asd (requalified) — aspartate-semialdehyde dehydrogenase asd lpqF (requalified) — serine hydrolase lpqF Rv2743c (family_assigned) — hypothetical protein Rv2743c lmeA (requalified) — mannan chain length control protein LmeA lmeA Rv0518 (family_assigned) — SGNH/GDSL hydrolase family protein Rv0518 Rv0479c (family_assigned) — DUF2993 domain-containing protein Rv0479c ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA Rv3906c (requalified) — pullulanase Rv3906c lprC (family_assigned) — DUF3558 domain-containing protein lprC Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c Rv0312 (family_assigned) — Hsp70 family protein Rv0312 fbpC (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpC ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA Rv1158c (dark) — hypothetical protein Rv1158c mtc28 (family_assigned) — LpqN/LpqT family lipoprotein mtc28 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccC3 (family_assigned) — type VII secretion system ESX-3 FtsK/SpoIIIE famil eccC3 eccE3 (family_assigned) — type VII secretion system ESX-3 subunit EccE3 eccE3 mycP3 (requalified) — type VII secretion system ESX-3 serine protease my mycP3 espG3 (requalified) — type VII secretion system ESX-3 associated protein espG3 eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 thrA (requalified) — homoserine dehydrogenase thrA asnB (requalified) — asparagine synthase (glutamine-hydrolyzing) asnB purA (requalified) — adenylosuccinate synthase purA argG (requalified) — argininosuccinate synthase argG nadB (requalified) — L-aspartate oxidase nadB dapA (requalified) — 4-hydroxy-tetrahydrodipicolinate synthase dapA dapF (requalified) — diaminopimelate epimerase dapF dapB (requalified) — 4-hydroxy-tetrahydrodipicolinate reductase dapB mhuD (requalified) — mycobilin-forming heme oxygenase MhuD mhuD Rv3591c (family_assigned) — alpha/beta hydrolase Rv3591c 35kd_ag (family_assigned) — hypothetical protein 35kd_ag lppL (family_assigned) — hypothetical protein lppL chiZ (requalified) — cell wall hydrolase ChiZ chiZ thiX (family_assigned) — thioredoxin family protein thiX hbhA (requalified) — heparin-binding hemagglutinin HbhA hbhA Rv0517 (requalified) — acyltransferase Rv0517 Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c Rv0480c (family_assigned) — carbon-nitrogen hydrolase family protein Rv0480c Rv0481c (family_assigned) — DUF2505 domain-containing protein Rv0481c Rv0227c (family_assigned) — membrane protein Rv0227c Rv1476 (family_assigned) — DUF6676 family protein Rv1476

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.