MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3697A · 45 genes shown · anchor vapC48 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapB48 (requalified) — antitoxin VapB48 vapB48 vapC48 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC48 glpK (requalified) — glycerol kinase GlpK glpK Rv3698 (family_assigned) — hypothetical protein Rv3698 Rv3699 (requalified) — class I SAM-dependent methyltransferase Rv3699 Rv3749c (family_assigned) — hypothetical protein Rv3749c Rv0298 (family_assigned) — ribbon-helix-helix protein%2C CopG family Rv0298 Rv0299 (requalified) — toxin-antitoxin system toxin Rv0299 Rv3750c (requalified) — excisionase Rv3750c Rv2019 (family_assigned) — hypothetical protein Rv2019 relK (family_assigned) — Txe/YoeB family addiction module toxin relK relE (requalified) — type II toxin-antitoxin system mRNA interferase Re relE higB (requalified) — type II toxin-antitoxin system toxin HigB higB vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43 vapC25 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC25 vapC31 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC31 glpD2 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD2 mpa (requalified) — proteasome ATPase mpa mec (requalified) — CysO-cysteine peptidase mec glpD1 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD1 prcB (family_assigned) — proteasome subunit beta prcB prcA (family_assigned) — proteasome subunit alpha prcA Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv0857 (family_assigned) — hypothetical protein Rv0857 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 Rv2751 (requalified) — class I SAM-dependent methyltransferase Rv2751 mbtG (requalified) — NADPH-dependent L-lysine N(6)-monooxygenase MbtG mbtG Rv2310 (requalified) — excisionase Rv2310 Rv0330c (family_assigned) — helix-turn-helix domain-containing protein Rv0330c Rv2018 (family_assigned) — DUF433 domain-containing protein Rv2018 Rv1045 (family_assigned) — nucleotidyl transferase AbiEii/AbiGii toxin family Rv1045 Rv0837c (family_assigned) — type IV toxin-antitoxin system AbiEi family antito Rv0837c vapB2 (requalified) — type II toxin-antitoxin system antitoxin VapB2 vapB2 vapC2 (family_assigned) — PIN domain nuclease vapC2 PE_PGRS5 (family_assigned) — PE-PGRS family protein PE_PGRS5 PE_PGRS5 Rv0302 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0302 Rv0303 (requalified) — protochlorophyllide reductase Rv0303 Rv2022c (family_assigned) — type II toxin-antitoxin system RelE/ParE family to Rv2022c Rv3182 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to Rv3182 Rv2017 (family_assigned) — ImmA/IrrE family metallo-endopeptidase Rv2017 Rv2016 (dark) — hypothetical protein Rv2016 relJ (requalified) — type II toxin-antitoxin system antitoxin RelJ relJ relB (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant relB relF (requalified) — type II toxin-antitoxin system antitoxin RelF relF Rv0268c (family_assigned) — hypothetical protein Rv0268c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.