MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3683 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3683 (requalified) — metallophosphoesterase Rv3683 Rv3684 (requalified) — lyase Rv3684 Rv2256c (dark) — hypothetical protein Rv2256c ponA2 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA2 Rv2680 (dark) — DUF3000 domain-containing protein Rv2680 Rv0811c (family_assigned) — folate-binding protein YgfZ Rv0811c whiA (family_assigned) — DNA-binding protein WhiA whiA Rv2146c (family_assigned) — YggT family protein Rv2146c pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv1002c (requalified) — dolichyl-phosphate-mannose--protein mannosyltransf Rv1002c whiB4 (family_assigned) — transcriptional regulator WhiB4 whiB4 Rv0004 (requalified) — DNA replication protein DciA Rv0004 cysE (requalified) — serine O-acetyltransferase cysE metB (requalified) — cystathionine gamma-synthase metB metZ (requalified) — O-succinylhomoserine sulfhydrylase metZ sirA (requalified) — sulfite reductase sirA cysK2 (requalified) — cysteine synthase CysK cysK2 cysK1 (requalified) — O-acetylserine sulfhydrylase cysK1 Rv2257c (family_assigned) — serine hydrolase domain-containing protein Rv2257c Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c Rv2033c (family_assigned) — DUF3097 domain-containing protein Rv2033c sepIVA (requalified) — cell division protein SepIVA sepIVA wag31 (requalified) — cell wall synthesis protein Wag31 wag31 Rv1209 (family_assigned) — DivIVA domain-containing protein Rv1209 rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA pbpA (requalified) — D%2CD-transpeptidase PbpA pbpA pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB Rv2681 (requalified) — ribonuclease D Rv2681 hemQ (requalified) — hydrogen peroxide-dependent heme synthase hemQ echA15 (family_assigned) — enoyl-CoA hydratase/isomerase family protein echA15 rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA Rv0812 (requalified) — 4-amino-4-deoxychorismate lyase Rv0812 Rv0810c (dark) — hypothetical protein Rv0810c Rv2204c (requalified) — iron-sulfur cluster assembly accessory protein Rv2204c cuvA (requalified) — carbon utilization/virulence protein CuvA cuvA rapZ (requalified) — RNase adapter RapZ rapZ uvrC (family_assigned) — excinuclease ABC subunit UvrC uvrC xerC (requalified) — tyrosine recombinase XerC xerC Rv2147c (requalified) — cell division protein SepF Rv2147c ftsZ (requalified) — cell division protein FtsZ ftsZ Rv2148c (family_assigned) — YggS family pyridoxal phosphate-dependent enzyme Rv2148c pheS (family_assigned) — phenylalanine--tRNA ligase subunit alpha pheS leuS (requalified) — leucine--tRNA ligase leuS ileS (requalified) — isoleucine--tRNA ligase ileS rpsB (requalified) — 30S ribosomal protein S2 rpsB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.