MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3682 · 46 genes shown · anchor rodA · open gene page → · ← back to 1 hop

Evidence: Min score 0
ponA2 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA2 sepIVA (requalified) — cell division protein SepIVA sepIVA wag31 (requalified) — cell wall synthesis protein Wag31 wag31 Rv1209 (family_assigned) — DivIVA domain-containing protein Rv1209 rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA pbpA (requalified) — D%2CD-transpeptidase PbpA pbpA pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB Rv2864c (family_assigned) — penicillin-binding protein Rv2864c pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT ftsW (family_assigned) — putative lipid II flippase FtsW ftsW Rv0358 (requalified) — peptidase M50 Rv0358 Rv1638A (family_assigned) — hypothetical protein Rv1638A ponA1 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA1 rnc (requalified) — ribonuclease III rnc Rv2926c (family_assigned) — hypothetical protein Rv2926c Rv3311 (family_assigned) — primosomal protein Rv3311 Rv2923c (family_assigned) — OsmC family protein Rv2923c Rv1083 (dark) — hypothetical protein Rv1083 Rv2144c (dark) — hypothetical protein Rv2144c Rv2146c (family_assigned) — YggT family protein Rv2146c Rv2147c (requalified) — cell division protein SepF Rv2147c lprO (family_assigned) — phosphodiester glycosidase family protein lprO Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c tagA (requalified) — DNA-3-methyladenine glycosylase I tagA folP2 (requalified) — dihydropteroate synthase folP2 gpgS (requalified) — glucosyl-3-phosphoglycerate synthase gpgS Rv2520c (dark) — DUF3618 domain-containing protein Rv2520c pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB pknA (requalified) — serine/threonine protein kinase PknA pknA pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP fhaB (family_assigned) — FHA domain-containing protein fhaB Rv2164c (family_assigned) — hypothetical protein Rv2164c rsmH (requalified) — 16S rRNA (cytosine(1402)-N(4))-methyltransferase R rsmH ftsQ (requalified) — cell division protein FtsQ ftsQ murC (requalified) — UDP-N-acetylmuramate--L-alanine ligase murC Rv2091c (family_assigned) — DUF4333 domain-containing protein Rv2091c Rv2867c (family_assigned) — GNAT family N-acetyltransferase Rv2867c pheS (family_assigned) — phenylalanine--tRNA ligase subunit alpha pheS leuS (requalified) — leucine--tRNA ligase leuS ileS (requalified) — isoleucine--tRNA ligase ileS rpsB (requalified) — 30S ribosomal protein S2 rpsB rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rplO (requalified) — 50S ribosomal protein L15 rplO murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.