MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3678c · 43 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3678c (family_assigned) — RidA family protein Rv3678c Rv3677c (requalified) — MBL fold metallo-hydrolase Rv3677c Rv3678A (family_assigned) — hypothetical protein Rv3678A Rv3679 (family_assigned) — ArsA family ATPase Rv3679 Rv3680 (family_assigned) — ArsA family ATPase Rv3680 fusA1 (requalified) — elongation factor G fusA1 fusA2 (family_assigned) — elongation factor G-like protein EF-G2 fusA2 rphA (requalified) — ribonuclease PH rphA ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c vapC11 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC11 Rv3040c (requalified) — NUDIX hydrolase Rv3040c Rv1211 (family_assigned) — hypothetical protein Rv1211 lsr2 (requalified) — histone-like nucleoid-structuring protein Lsr2 lsr2 Rv0487 (family_assigned) — YbjN domain-containing protein Rv0487 TB16.3 (family_assigned) — SRPBCC family protein TB16.3 Rv0502 (family_assigned) — lysophospholipid acyltransferase family protein Rv0502 rpsG (requalified) — 30S ribosomal protein S7 rpsG rpsL (requalified) — 30S ribosomal protein S12 rpsL rplB (requalified) — 50S ribosomal protein L2 rplB rplD (requalified) — 50S ribosomal protein L4 rplD tuf (requalified) — elongation factor Tu tuf rplC (requalified) — 50S ribosomal protein L3 rplC rpsE (requalified) — 30S ribosomal protein S5 rpsE rplE (requalified) — 50S ribosomal protein L5 rplE rdgB (family_assigned) — RdgB/HAM1 family non-canonical purine NTP pyrophos rdgB Rv2681 (requalified) — ribonuclease D Rv2681 rpsA (requalified) — 30S ribosomal protein S1 rpsA Rv1339 (family_assigned) — hypothetical protein Rv1339 rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsK (requalified) — 30S ribosomal protein S11 rpsK ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 ribC (requalified) — riboflavin synthase ribC ribH (requalified) — 6%2C7-dimethyl-8-ribityllumazine synthase ribH Rv1722 (requalified) — biotin carboxylase Rv1722 rpe (requalified) — ribulose-phosphate 3-epimerase rpe Rv1700 (requalified) — ADP-ribose diphosphatase Rv1700 Rv3672c (requalified) — CoA pyrophosphatase Rv3672c Rv2609c (family_assigned) — NUDIX domain-containing protein Rv2609c rhlE (requalified) — DEAD/DEAH box helicase rhlE deaD (requalified) — DEAD/DEAH box helicase deaD gadB (requalified) — glutamate decarboxylase gadB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.