MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3671c · 46 genes shown · anchor nth · open gene page → · ← back to 1 hop

Evidence: Min score 0
marP (requalified) — acid resistance serine protease MarP marP Rv3672c (requalified) — CoA pyrophosphatase Rv3672c mpa (requalified) — proteasome ATPase mpa nth (requalified) — endonuclease III nth Rv0175 (family_assigned) — hypothetical protein Rv0175 glpK (requalified) — glycerol kinase GlpK glpK mec (requalified) — CysO-cysteine peptidase mec Rv3675 (dark) — hypothetical protein Rv3675 Rv3673c (family_assigned) — membrane-anchored thioredoxin-like protein Rv3673c crp (family_assigned) — cAMP-activated global transcriptional regulator CR crp prcA (family_assigned) — proteasome subunit alpha prcA thiO (requalified) — glycine oxidase ThiO thiO aao (requalified) — FAD-dependent oxidoreductase aao Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c rhlE (requalified) — DEAD/DEAH box helicase rhlE deaD (requalified) — DEAD/DEAH box helicase deaD amiC (requalified) — amidase amiC pup (family_assigned) — ubiquitin-like protein Pup pup prcB (family_assigned) — proteasome subunit beta prcB bpa (requalified) — proteasome activator protein Bpa bpa xthA (requalified) — exodeoxyribonuclease III protein XthA xthA Rv0178 (requalified) — Mce associated membrane protein Rv0178 Rv0176 (family_assigned) — RDD family protein Rv0176 Rv0177 (requalified) — Mce associated protein Rv0177 mce1F (family_assigned) — MCE family protein mce1F mce1C (family_assigned) — MCE family protein mce1C mce1B (family_assigned) — virulence factor Mce family protein mce1B glpD2 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD2 glpD1 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD1 cysM (requalified) — O-phosphoserine sulfhydrylase cysM cysO (requalified) — sulfur carrier protein CysO cysO rpsC (requalified) — 30S ribosomal protein S3 rpsC rpsS (requalified) — 30S ribosomal protein S19 rpsS lprJ (requalified) — lipoprotein LprJ lprJ ahpC (requalified) — peroxiredoxin AhpC ahpC msrA (requalified) — peptide-methionine (S)-S-oxide reductase MsrA msrA lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC Rv0794c (requalified) — oxidoreductase Rv0794c Rv2239c (family_assigned) — hypothetical protein Rv2239c Rv3645 (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv3645 Rv1339 (family_assigned) — hypothetical protein Rv1339 Rv2212 (requalified) — adenylyl cyclase Rv2212 cya (requalified) — adenylate cyclase cya dop (requalified) — pup deamidase/depupylase dop pafA (requalified) — Pup--protein ligase pafA thiG (requalified) — thiazole synthase thiG

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.