MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3659c · 25 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3659c (requalified) — conjugal transfer protein Rv3659c Rv3657c (family_assigned) — membrane protein Rv3657c ssd (requalified) — septum site-determining protein Ssd ssd Rv3658c (family_assigned) — type II secretion system F family protein Rv3658c Rv3655c (requalified) — apoptosis inhibitor Rv3655c Rv3656c (dark) — DUF4244 domain-containing protein Rv3656c Rv3654c (family_assigned) — hypothetical protein Rv3654c Rv0990c (family_assigned) — SAF domain-containing protein Rv0990c Rv3454 (family_assigned) — Probable conserved integral membrane protein Rv3454 Rv3236c (requalified) — integral membrane transport protein Rv3236c Rv3453 (family_assigned) — Possible conserved transmembrane protein Rv3453 Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv0991c (family_assigned) — FmdB family zinc ribbon protein Rv0991c phoR (requalified) — sensory box histidine kinase PhoR phoR pyrB (family_assigned) — aspartate carbamoyltransferase catalytic subunit pyrB carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB carA (family_assigned) — glutamine-hydrolyzing carbamoyl-phosphate synthase carA thiD (requalified) — hydroxymethylpyrimidine/phosphomethylpyrimidine ki thiD Rv3237c (family_assigned) — cation:proton antiporter regulatory subunit Rv3237c Rv3238c (family_assigned) — isoprenylcysteine carboxylmethyltransferase family Rv3238c secA1 (family_assigned) — protein translocase subunit SecA secA1 raiA (requalified) — ribosome-associated translation inhibitor RaiA raiA Rv3239c (requalified) — MFS transporter Rv3239c ctpH (requalified) — cation-translocating P-type ATPase ctpH Rv1382 (requalified) — transporter Rv1382

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.