MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3648c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
cspA (requalified) — cold shock protein CspA cspA rpsL (requalified) — 30S ribosomal protein S12 rpsL rplO (requalified) — 50S ribosomal protein L15 rplO tuf (requalified) — elongation factor Tu tuf rpmJ (requalified) — 50S ribosomal protein L36 rpmJ esxJ (requalified) — type VII secretion system ESX-5 protein EsxJ esxJ rpmE (requalified) — 50S ribosomal protein L31 rpmE esxO (requalified) — type VII secretion system effector EsxO esxO esxP (requalified) — type VII secretion system ESX-5 protein EsxJ esxP rplA (requalified) — 50S ribosomal protein L1 rplA esxW (requalified) — type VII secretion system protein EsxW esxW esxN (requalified) — ESAT-6 like protein EsxN esxN esxK (requalified) — type VII secretion system ESX-5 protein EsxJ esxK rpsN1 (requalified) — 30S ribosomal protein S14 rpsN1 rplT (requalified) — 50S ribosomal protein L20 rplT rpsI (requalified) — 30S ribosomal protein S9 rpsI rpsJ (requalified) — 30S ribosomal protein S10 rpsJ rplV (requalified) — 50S ribosomal protein L22 rplV rpsK (requalified) — 30S ribosomal protein S11 rpsK rplN (requalified) — 50S ribosomal protein L14 rplN rpsM (requalified) — 30S ribosomal protein S13 rpsM rplC (requalified) — 50S ribosomal protein L3 rplC rpsP (requalified) — 30S ribosomal protein S16 rpsP rpmI (requalified) — 50S ribosomal protein L35 rpmI rplX (requalified) — 50S ribosomal protein L24 rplX tsf (requalified) — translation elongation factor Ts tsf rpsE (requalified) — 30S ribosomal protein S5 rpsE rplB (requalified) — 50S ribosomal protein L2 rplB rplU (requalified) — 50S ribosomal protein L21 rplU rpsC (requalified) — 30S ribosomal protein S3 rpsC rpmD (requalified) — 50S ribosomal protein L30 rpmD rplI (requalified) — 50S ribosomal protein L9 rplI rplF (requalified) — 50S ribosomal protein L6 rplF rplM (requalified) — 50S ribosomal protein L13 rplM esxI (requalified) — type VII secretion system ESX-5 protein EsxL esxI esxL (requalified) — type VII secretion system ESX-5 protein EsxL esxL rpsG (requalified) — 30S ribosomal protein S7 rpsG rplW (requalified) — 50S ribosomal protein L23 rplW rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsS (requalified) — 30S ribosomal protein S19 rpsS rpsF (requalified) — 30S ribosomal protein S6 rpsF rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 rplK (requalified) — 50S ribosomal protein L11 rplK rplP (requalified) — 50S ribosomal protein L16 rplP rplJ (requalified) — 50S ribosomal protein L10 rplJ rpmC (requalified) — 50S ribosomal protein L29 rpmC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.