MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3647c · 46 genes shown · anchor cspA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3647c (family_assigned) — hypothetical protein Rv3647c cspA (requalified) — cold shock protein CspA cspA topA (requalified) — type I DNA topoisomerase topA espR (family_assigned) — type VII secretion system ESX-1 transcriptional re espR Rv0996 (family_assigned) — hypothetical protein Rv0996 ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA Rv1303 (family_assigned) — ATP synthase subunit I Rv1303 Rv1109c (requalified) — lipid droplet-associated protein Rv1109c Rv2732c (family_assigned) — hypothetical protein Rv2732c Rv3818 (requalified) — MBL fold metallo-hydrolase Rv3818 Rv0863 (family_assigned) — hypothetical protein Rv0863 hbhA (requalified) — heparin-binding hemagglutinin HbhA hbhA Rv2049c (family_assigned) — hypothetical protein Rv2049c rpsL (requalified) — 30S ribosomal protein S12 rpsL rplO (requalified) — 50S ribosomal protein L15 rplO tuf (requalified) — elongation factor Tu tuf rpmJ (requalified) — 50S ribosomal protein L36 rpmJ esxJ (requalified) — type VII secretion system ESX-5 protein EsxJ esxJ rpmE (requalified) — 50S ribosomal protein L31 rpmE Rv2529 (family_assigned) — hypothetical protein Rv2529 Rv1278 (family_assigned) — AAA family ATPase Rv1278 recA (requalified) — intein-containing recombinase RecA recA polA (requalified) — DNA polymerase I polA Rv1277 (family_assigned) — hypothetical protein Rv1277 Rv2090 (requalified) — 5'-3' exonuclease Rv2090 Rv3850 (family_assigned) — DUF6474 family protein Rv3850 Rv0882 (dark) — DUF2537 domain-containing protein Rv0882 Rv2091c (family_assigned) — DUF4333 domain-containing protein Rv2091c rseA (requalified) — anti-sigma E factor RseA rseA Rv3212 (family_assigned) — hypothetical protein Rv3212 moeA1 (requalified) — molybdopterin molybdenumtransferase 1 moeA1 Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 Rv0385 (requalified) — FAD-binding oxidoreductase Rv0385 Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 pyrE (requalified) — orotate phosphoribosyltransferase pyrE pyrD (requalified) — quinone-dependent dihydroorotate dehydrogenase pyrD carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB Rv0381c (dark) — hypothetical protein Rv0381c atpB (family_assigned) — F0F1 ATP synthase subunit A atpB atpE (family_assigned) — F0F1 ATP synthase subunit C atpE atpF (family_assigned) — F0F1 ATP synthase subunit B atpF atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA xseA (family_assigned) — exodeoxyribonuclease VII large subunit xseA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.