MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3644c · 40 genes shown · anchor dnaN · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c dnaN (family_assigned) — DNA polymerase III subunit beta dnaN dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 Rv2191 (family_assigned) — hypothetical protein Rv2191 dnaQ (family_assigned) — DEDDh family exonuclease dnaQ dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX ssb (family_assigned) — single-stranded DNA-binding protein ssb Rv2478c (family_assigned) — hypothetical protein Rv2478c dnaE2 (requalified) — error-prone DNA polymerase dnaE2 lppK (family_assigned) — hypothetical protein lppK thiL (requalified) — thiamine-phosphate kinase thiL Rv3195 (requalified) — zinc-dependent metalloprotease Rv3195 polA (requalified) — DNA polymerase I polA dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA uvrB (family_assigned) — excinuclease ABC subunit UvrB uvrB rplI (requalified) — 50S ribosomal protein L9 rplI rpsF (requalified) — 30S ribosomal protein S6 rpsF rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 dnaB (requalified) — replicative DNA helicase dnaB Rv2228c (requalified) — multifunctional RNASE H/alpha-ribazole phosphatase Rv2228c ettA (requalified) — energy-dependent translational throttle protein Et ettA priA (family_assigned) — primosomal protein N' priA Rv3394c (family_assigned) — DNA polymerase Y family protein Rv3394c Rv3395c (family_assigned) — hypothetical protein Rv3395c Rv2090 (requalified) — 5'-3' exonuclease Rv2090 helZ (requalified) — DEAD/DEAH box helicase helZ ligC (requalified) — ATP-dependent DNA ligase ligC ligB (requalified) — ATP-dependent DNA ligase ligB tnpB (family_assigned) — IS607 family element RNA-guided endonuclease TnpB tnpB Rv2979c (family_assigned) — IS607 family transposase Rv2979c radA (requalified) — DNA repair protein RadA radA thiE (requalified) — thiamine phosphate synthase thiE adk (requalified) — adenylate kinase adk rsgA (family_assigned) — ribosome small subunit-dependent GTPase A rsgA Rv3194c (family_assigned) — PDZ domain-containing protein Rv3194c Rv3196 (family_assigned) — hypothetical protein Rv3196 clpP2 (family_assigned) — ATP-dependent CLP protease proteolytic subunit Clp clpP2 Rv1998c (family_assigned) — isocitrate lyase/phosphoenolpyruvate mutase family Rv1998c Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.