MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3627c · 46 genes shown · anchor mesJ · open gene page → · ← back to 1 hop

Evidence: Min score 0
dacB (requalified) — D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-ala dacB Rv3626c (requalified) — zinc-dependent metalloprotease Rv3626c mesJ (requalified) — tRNA lysidine(34) synthetase TilS mesJ dacB1 (requalified) — D-alanyl-D-alanine carboxypeptidase DacB1 dacB1 dacB2 (family_assigned) — penicillin-binding protein DacB2 dacB2 hpt (requalified) — hypoxanthine phosphoribosyltransferase hpt ppa (requalified) — inorganic diphosphatase ppa omamB (requalified) — hypothetical protein omamB Rv0178 (requalified) — Mce associated membrane protein Rv0178 omamA (requalified) — hypothetical protein omamA Rv1972 (requalified) — Mce associated membrane protein Rv1972 Rv1973 (family_assigned) — hypothetical protein Rv1973 Rv1363c (dark) — hypothetical protein Rv1363c Rv2867c (family_assigned) — GNAT family N-acetyltransferase Rv2867c Rv2239c (family_assigned) — hypothetical protein Rv2239c thiS (requalified) — sulfur carrier protein ThiS thiS pth (requalified) — aminoacyl-tRNA hydrolase pth nagA (requalified) — N-acetylglucosamine-6-phosphate deacetylase nagA sugI (requalified) — sugar-transport integral membrane protein SugI sugI Rv3329 (requalified) — aminotransferase Rv3329 ponA1 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA1 rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA ldtB (requalified) — L%2CD-transpeptidase LdtMt2 ldtB Rv2910c (family_assigned) — hypothetical protein Rv2910c guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA deoD (requalified) — purine-nucleoside phosphorylase deoD Rv1021 (requalified) — nucleoside triphosphate pyrophosphohydrolase Rv1021 purA (requalified) — adenylosuccinate synthase purA apt (requalified) — adenine phosphoribosyltransferase apt atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH atpF (family_assigned) — F0F1 ATP synthase subunit B atpF atpE (family_assigned) — F0F1 ATP synthase subunit C atpE atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 pks12 (requalified) — type I polyketide synthase pks12 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC mas (requalified) — mycocerosate synthase mas pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 Rv0175 (family_assigned) — hypothetical protein Rv0175 Rv0176 (family_assigned) — RDD family protein Rv0176 Rv0177 (requalified) — Mce associated protein Rv0177 mce1F (family_assigned) — MCE family protein mce1F mce1C (family_assigned) — MCE family protein mce1C phoY1 (requalified) — phosphate signaling complex protein PhoU phoY1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.