MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3625c · 46 genes shown · anchor hpt · open gene page → · ← back to 1 hop

Evidence: Min score 0
mesJ (requalified) — tRNA lysidine(34) synthetase TilS mesJ hpt (requalified) — hypoxanthine phosphoribosyltransferase hpt dacB (requalified) — D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-ala dacB Rv3626c (requalified) — zinc-dependent metalloprotease Rv3626c thiS (requalified) — sulfur carrier protein ThiS thiS ppa (requalified) — inorganic diphosphatase ppa pth (requalified) — aminoacyl-tRNA hydrolase pth mfd (requalified) — transcription-repair coupling factor mfd truA (requalified) — tRNA pseudouridine synthase A truA typA (requalified) — translational GTPase TypA typA murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG trmI (requalified) — tRNA (adenine(58)-N(1))-methyltransferase TrmI trmI guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA deoD (requalified) — purine-nucleoside phosphorylase deoD Rv1021 (requalified) — nucleoside triphosphate pyrophosphohydrolase Rv1021 purA (requalified) — adenylosuccinate synthase purA apt (requalified) — adenine phosphoribosyltransferase apt dacB1 (requalified) — D-alanyl-D-alanine carboxypeptidase DacB1 dacB1 dacB2 (family_assigned) — penicillin-binding protein DacB2 dacB2 Rv2867c (family_assigned) — GNAT family N-acetyltransferase Rv2867c Rv2239c (family_assigned) — hypothetical protein Rv2239c thiG (requalified) — thiazole synthase thiG thiE (requalified) — thiamine phosphate synthase thiE thiO (requalified) — glycine oxidase ThiO thiO thiC (requalified) — phosphomethylpyrimidine synthase ThiC thiC mec (requalified) — CysO-cysteine peptidase mec atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH atpF (family_assigned) — F0F1 ATP synthase subunit B atpF atpE (family_assigned) — F0F1 ATP synthase subunit C atpE atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY ychF (requalified) — redox-regulated ATPase YchF ychF lpqT (requalified) — lipoprotein LpqT lpqT rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB uvrA (family_assigned) — excinuclease ABC subunit UvrA uvrA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rplQ (requalified) — 50S ribosomal protein L17 rplQ rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsK (requalified) — 30S ribosomal protein S11 rpsK rpsM (requalified) — 30S ribosomal protein S13 rpsM truB (requalified) — tRNA pseudouridine(55) synthase TruB truB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.