MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3604c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c Rv3605c (family_assigned) — DUF3180 domain-containing protein Rv3605c Rv0955 (family_assigned) — DUF6350 family protein Rv0955 rsmA (requalified) — anti-sigma-M factor RsmA rsmA pimE (requalified) — mannosyltransferase pimE Rv0804 (family_assigned) — CPBP family intramembrane glutamic endopeptidase Rv0804 PPE2 (family_assigned) — PPE family protein PPE2 PPE2 panC (requalified) — pantoate--beta-alanine ligase panC Rv3600c (requalified) — type III pantothenate kinase Rv3600c Rv3603c (family_assigned) — Rossmann-like and DUF2520 domain-containing protei Rv3603c panD (requalified) — aspartate 1-decarboxylase panD folB (requalified) — dihydroneopterin aldolase folB folK (requalified) — 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine folK folE (requalified) — GTP cyclohydrolase I FolE folE folP1 (requalified) — dihydropteroate synthase folP1 ftsH (requalified) — ATP-dependent zinc metalloprotease FtsH ftsH Rv0954 (requalified) — DUF5336 domain-containing protein Rv0954 mbtG (requalified) — NADPH-dependent L-lysine N(6)-monooxygenase MbtG mbtG purN (requalified) — phosphoribosylglycinamide formyltransferase purN purH (requalified) — bifunctional phosphoribosylaminoimidazolecarboxami purH sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM Rv3909 (dark) — hypothetical protein Rv3909 murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ mutT4 (requalified) — NUDIX hydrolase mutT4 trxC (requalified) — thioredoxin trxC trxB2 (requalified) — thioredoxin-disulfide reductase trxB2 Rv1158c (dark) — hypothetical protein Rv1158c Rv0051 (family_assigned) — glycosyltransferase family 87 protein Rv0051 Rv1157c (dark) — hypothetical protein Rv1157c aftD (family_assigned) — DUF3367 domain-containing protein aftD purL (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purL Rv2633c (requalified) — non-heme di-iron catalase Rv2633c Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 Rv3896c (requalified) — transglycosylase Rv3896c cobQ1 (requalified) — cobyric acid synthase cobQ1 pirG (requalified) — exported repetitive protein pirG eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c Rv0479c (family_assigned) — DUF2993 domain-containing protein Rv0479c panB (requalified) — 3-methyl-2-oxobutanoate hydroxymethyltransferase panB gadB (requalified) — glutamate decarboxylase gadB Rv2573 (requalified) — 2-dehydropantoate 2-reductase Rv2573 dfp (requalified) — bifunctional phosphopantothenoylcysteine decarboxy dfp kdtB (requalified) — pantetheine-phosphate adenylyltransferase kdtB coaA (requalified) — pantothenate kinase coaA lysS (requalified) — lysine--tRNA ligase lysS

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.