MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3600c · 46 genes shown · anchor panC · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3600c (requalified) — type III pantothenate kinase Rv3600c panC (requalified) — pantoate--beta-alanine ligase panC panD (requalified) — aspartate 1-decarboxylase panD dfp (requalified) — bifunctional phosphopantothenoylcysteine decarboxy dfp kdtB (requalified) — pantetheine-phosphate adenylyltransferase kdtB coaA (requalified) — pantothenate kinase coaA Rv3603c (family_assigned) — Rossmann-like and DUF2520 domain-containing protei Rv3603c lysS (requalified) — lysine--tRNA ligase lysS Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c lsr2 (requalified) — histone-like nucleoid-structuring protein Lsr2 lsr2 ftsH (requalified) — ATP-dependent zinc metalloprotease FtsH ftsH folE (requalified) — GTP cyclohydrolase I FolE folE folP1 (requalified) — dihydropteroate synthase folP1 panB (requalified) — 3-methyl-2-oxobutanoate hydroxymethyltransferase panB gadB (requalified) — glutamate decarboxylase gadB Rv2573 (requalified) — 2-dehydropantoate 2-reductase Rv2573 aldA (requalified) — aldehyde dehydrogenase aldA Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ gmk (requalified) — guanylate kinase gmk rsmD (requalified) — 16S rRNA (guanine(966)-N(2))-methyltransferase Rsm rsmD coaE (requalified) — dephospho-CoA kinase coaE ribF (requalified) — bifunctional riboflavin kinase /FMN adenylyltransf ribF Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c glyA1 (requalified) — serine hydroxymethyltransferase glyA1 lysX (requalified) — bifunctional lysine--tRNA ligase/phosphatidylglyce lysX gltS (requalified) — glutamate--tRNA ligase gltS ileS (requalified) — isoleucine--tRNA ligase ileS guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA argS (requalified) — arginine--tRNA ligase argS metS (requalified) — methionine--tRNA ligase metS Rv3605c (family_assigned) — DUF3180 domain-containing protein Rv3605c Rv0955 (family_assigned) — DUF6350 family protein Rv0955 rsmA (requalified) — anti-sigma-M factor RsmA rsmA pimE (requalified) — mannosyltransferase pimE Rv0804 (family_assigned) — CPBP family intramembrane glutamic endopeptidase Rv0804 PPE2 (family_assigned) — PPE family protein PPE2 PPE2 clpC1 (family_assigned) — ATP-dependent protease ATP-binding subunit ClpC clpC1 folB (requalified) — dihydroneopterin aldolase folB Rv1488 (family_assigned) — SPFH domain-containing protein Rv1488 Rv3090 (family_assigned) — SPFH domain-containing protein Rv3090 rplS (requalified) — 50S ribosomal protein L19 rplS folK (requalified) — 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine folK ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 folC (requalified) — bifunctional tetrahydrofolate synthase/dihydrofola folC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.