MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3597c · 46 genes shown · anchor clpC1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
lsr2 (requalified) — histone-like nucleoid-structuring protein Lsr2 lsr2 clpC1 (family_assigned) — ATP-dependent protease ATP-binding subunit ClpC clpC1 panD (requalified) — aspartate 1-decarboxylase panD panC (requalified) — pantoate--beta-alanine ligase panC Rv3600c (requalified) — type III pantothenate kinase Rv3600c Rv3603c (family_assigned) — Rossmann-like and DUF2520 domain-containing protei Rv3603c Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c ftsH (requalified) — ATP-dependent zinc metalloprotease FtsH ftsH lysS (requalified) — lysine--tRNA ligase lysS folB (requalified) — dihydroneopterin aldolase folB Rv3605c (family_assigned) — DUF3180 domain-containing protein Rv3605c Rv2256c (dark) — hypothetical protein Rv2256c folP1 (requalified) — dihydropteroate synthase folP1 clpP2 (family_assigned) — ATP-dependent CLP protease proteolytic subunit Clp clpP2 clpS (requalified) — ATP-dependent Clp protease adapter ClpS clpS clpP1 (family_assigned) — ATP-dependent CLP protease proteolytic subunit 1 clpP1 dnaK (requalified) — molecular chaperone DnaK dnaK Rv0312 (family_assigned) — Hsp70 family protein Rv0312 Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c panB (requalified) — 3-methyl-2-oxobutanoate hydroxymethyltransferase panB aldA (requalified) — aldehyde dehydrogenase aldA Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c gadB (requalified) — glutamate decarboxylase gadB Rv2573 (requalified) — 2-dehydropantoate 2-reductase Rv2573 dfp (requalified) — bifunctional phosphopantothenoylcysteine decarboxy dfp kdtB (requalified) — pantetheine-phosphate adenylyltransferase kdtB coaA (requalified) — pantothenate kinase coaA Rv0955 (family_assigned) — DUF6350 family protein Rv0955 rsmA (requalified) — anti-sigma-M factor RsmA rsmA pimE (requalified) — mannosyltransferase pimE Rv0804 (family_assigned) — CPBP family intramembrane glutamic endopeptidase Rv0804 PPE2 (family_assigned) — PPE family protein PPE2 PPE2 folE (requalified) — GTP cyclohydrolase I FolE folE Rv1488 (family_assigned) — SPFH domain-containing protein Rv1488 Rv3090 (family_assigned) — SPFH domain-containing protein Rv3090 rplS (requalified) — 50S ribosomal protein L19 rplS lysX (requalified) — bifunctional lysine--tRNA ligase/phosphatidylglyce lysX gltS (requalified) — glutamate--tRNA ligase gltS ileS (requalified) — isoleucine--tRNA ligase ileS guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA argS (requalified) — arginine--tRNA ligase argS metS (requalified) — methionine--tRNA ligase metS folK (requalified) — 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine folK folP2 (requalified) — dihydropteroate synthase folP2 Rv2146c (family_assigned) — YggT family protein Rv2146c Rv2257c (family_assigned) — serine hydrolase domain-containing protein Rv2257c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.