MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3595c · 41 genes shown · anchor clpC1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE_PGRS59 (family_assigned) — PE-PGRS family protein PE_PGRS59 PE_PGRS59 clpC1 (family_assigned) — ATP-dependent protease ATP-binding subunit ClpC clpC1 zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 Rv1146 (requalified) — transmembrane transport protein Rv1146 PPE13 (family_assigned) — PPE family protein PPE13 PPE13 PPE9 (family_assigned) — PPE family protein PPE9 PPE9 PPE7 (family_assigned) — PPE family protein PPE7 PPE7 clpP2 (family_assigned) — ATP-dependent CLP protease proteolytic subunit Clp clpP2 clpS (requalified) — ATP-dependent Clp protease adapter ClpS clpS clpP1 (family_assigned) — ATP-dependent CLP protease proteolytic subunit 1 clpP1 dnaK (requalified) — molecular chaperone DnaK dnaK Rv0312 (family_assigned) — Hsp70 family protein Rv0312 Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c omamA (requalified) — hypothetical protein omamA omamB (requalified) — hypothetical protein omamB polA (requalified) — DNA polymerase I polA ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB Rv3633 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv3633 Rv1501 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv1501 Rv1145 (requalified) — transmembrane transport protein Rv1145 Rv1147 (family_assigned) — methyltransferase domain-containing protein Rv1147 rslA (requalified) — anti-sigma-L factor RslA rslA Rv2714 (family_assigned) — PAC2 family protein Rv2714 mmpL11 (requalified) — RND transporter MmpL11 mmpL11 PE_PGRS22 (family_assigned) — PE-PGRS family protein PE_PGRS22 PE_PGRS22 Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 PE_PGRS2 (family_assigned) — PE-PGRS family protein PE_PGRS2 PE_PGRS2 Rv1004c (family_assigned) — hypothetical protein Rv1004c PE_PGRS15 (family_assigned) — PE-PGRS family protein PE_PGRS15 PE_PGRS15 PE_PGRS30 (family_assigned) — PE-PGRS family protein PE_PGRS30 PE_PGRS30 Rv0387c (family_assigned) — Conserved hypothetical protein Rv0387c purT (requalified) — phosphoribosylglycinamide formyltransferase 2 purT Rv0390 (family_assigned) — rhodanese-like domain-containing protein Rv0390 metZ (requalified) — O-succinylhomoserine sulfhydrylase metZ PE_PGRS40 (family_assigned) — PE-PGRS family protein PE_PGRS40 PE_PGRS40 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 purA (requalified) — adenylosuccinate synthase purA PPE39 (family_assigned) — PPE family protein PPE39 PPE39 Rv2345 (family_assigned) — TPM domain-containing protein Rv2345 PPE66 (family_assigned) — PPE family protein PPE66 PPE66

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.