MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3590c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE_PGRS58 (family_assigned) — PE-PGRS family protein PE_PGRS58 PE_PGRS58 Rv3591c (family_assigned) — alpha/beta hydrolase Rv3591c mhuD (requalified) — mycobilin-forming heme oxygenase MhuD mhuD lpqF (requalified) — serine hydrolase lpqF zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 Rv1987 (family_assigned) — cellulose-binding protein Rv1987 PPE40 (family_assigned) — PPE family protein PPE40 PPE40 mce3C (family_assigned) — virulence factor Mce family protein mce3C PE10 (family_assigned) — PE family protein PE10 PE10 Rv2120c (family_assigned) — glycine zipper 2TM domain-containing protein Rv2120c PPE29 (family_assigned) — PPE family protein PPE29 PPE29 PPE67 (family_assigned) — PPE family protein PPE67 PPE67 PE2 (family_assigned) — PE family protein PE2 PE2 lipV (requalified) — lipase LipV lipV octT (requalified) — diglucosylglycerate octanoyltransferase octT Rv3415c (family_assigned) — hypothetical protein Rv3415c hycE (family_assigned) — NADH-quinone oxidoreductase subunit C hycE Rv3594 (requalified) — N-acetylmuramoyl-L-alanine amidase Rv3594 Rv0959 (family_assigned) — VWA domain-containing protein Rv0959 pirG (requalified) — exported repetitive protein pirG Rv3707c (requalified) — hypothetical protein Rv3707c Rv2743c (family_assigned) — hypothetical protein Rv2743c eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 omamA (requalified) — hypothetical protein omamA omamB (requalified) — hypothetical protein omamB polA (requalified) — DNA polymerase I polA ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB Rv3633 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv3633 Rv1501 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv1501 sigD (requalified) — ECF RNA polymerase sigma factor SigD sigD Rv0315 (requalified) — family 16 glycosylhydrolase Rv0315 Rv0518 (family_assigned) — SGNH/GDSL hydrolase family protein Rv0518 Rv1836c (family_assigned) — substrate-binding domain-containing protein Rv1836c Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 PE_PGRS48 (family_assigned) — PE-PGRS family protein PE_PGRS48 PE_PGRS48 PE_PGRS2 (family_assigned) — PE-PGRS family protein PE_PGRS2 PE_PGRS2 PE_PGRS23 (family_assigned) — PE-PGRS family protein PE_PGRS23 PE_PGRS23 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 Rv1004c (family_assigned) — hypothetical protein Rv1004c yrbE3A (family_assigned) — ABC transporter permease yrbE3A yrbE3B (family_assigned) — ABC transporter permease yrbE3B lprM (family_assigned) — Mce family lipoprotein LprM lprM mce3A (family_assigned) — Mce family protein Mce3A mce3A Rv1972 (requalified) — Mce associated membrane protein Rv1972 mce3F (family_assigned) — MlaD family protein mce3F PE9 (family_assigned) — PE family protein PE9 PE9

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.