MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3589 · 46 genes shown · anchor canB · open gene page → · ← back to 1 hop

Evidence: Min score 0
mutY (requalified) — A/G-specific adenine glycosylase mutY xthA (requalified) — exodeoxyribonuclease III protein XthA xthA canB (requalified) — beta-carbonic anhydrase CanB canB Rv3587c (family_assigned) — hypothetical protein Rv3587c lppK (family_assigned) — hypothetical protein lppK dnaN (family_assigned) — DNA polymerase III subunit beta dnaN nth (requalified) — endonuclease III nth ogt (requalified) — methylated-DNA--protein-cysteine methyltransferase ogt dinX (requalified) — DNA polymerase IV dinX xseA (family_assigned) — exodeoxyribonuclease VII large subunit xseA radA (requalified) — DNA repair protein RadA radA marP (requalified) — acid resistance serine protease MarP marP Rv2191 (family_assigned) — hypothetical protein Rv2191 def (requalified) — peptide deformylase def Rv0428c (family_assigned) — GNAT family N-acetyltransferase Rv0428c end (requalified) — deoxyribonuclease IV end Rv3273 (requalified) — transmembrane carbonic anhydrase Rv3273 canA (requalified) — beta-carbonic anhydrase CanA canA apt (requalified) — adenine phosphoribosyltransferase apt Rv1707 (family_assigned) — SulP family inorganic anion transporter Rv1707 Rv3258c (dark) — hypothetical protein Rv3258c Rv0010c (family_assigned) — PH domain-containing protein Rv0010c lpqB (requalified) — MtrAB system accessory lipoprotein LpqB lpqB Rv0207c (family_assigned) — NYN domain-containing protein Rv0207c polA (requalified) — DNA polymerase I polA Rv2090 (requalified) — 5'-3' exonuclease Rv2090 dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA helZ (requalified) — DEAD/DEAH box helicase helZ ligC (requalified) — ATP-dependent DNA ligase ligC ligB (requalified) — ATP-dependent DNA ligase ligB dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX Rv3673c (family_assigned) — membrane-anchored thioredoxin-like protein Rv3673c Rv3675 (dark) — hypothetical protein Rv3675 Rv3672c (requalified) — CoA pyrophosphatase Rv3672c crp (family_assigned) — cAMP-activated global transcriptional regulator CR crp alkA (family_assigned) — bifunctional regulatory protein/DNA repair enzyme alkA Rv1318c (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv1318c tagA (requalified) — DNA-3-methyladenine glycosylase I tagA Rv1321 (requalified) — endonuclease NucS Rv1321 Rv1322 (family_assigned) — hypothetical protein Rv1322 Rv1319c (requalified) — adenylate cyclase Rv1319c recA (requalified) — intein-containing recombinase RecA recA Rv3395c (family_assigned) — hypothetical protein Rv3395c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.