MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3571 · 45 genes shown · anchor kshA · open gene page → · ← back to 1 hop

Evidence: Min score 0
kshB (family_assigned) — 3-ketosteroid-9-alpha-hydroxylase reductase subuni kshB kshA (family_assigned) — 3-ketosteroid-9-alpha-hydroxylase subunit KshA kshA kstD (requalified) — 3-oxosteroid 1-dehydrogenase kstD hsaC (requalified) — iron-dependent extradiol dioxygenase HsaC hsaC hsaA (family_assigned) — flavin-dependent monooxygenase oxygenase subunit H hsaA Rv3572 (family_assigned) — hypothetical protein Rv3572 Rv1465 (family_assigned) — SUF system NifU family Fe-S cluster assembly prote Rv1465 iscS (family_assigned) — cysteine desulfurase family protein iscS hsaD (requalified) — alpha/beta fold hydrolase hsaD hsaB (family_assigned) — flavin-dependent monooxygenase reductase subunit H hsaB fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA Rv3527 (family_assigned) — hypothetical protein Rv3527 Rv3531c (family_assigned) — hypothetical protein Rv3531c Rv3538 (requalified) — dehydrogenase Rv3538 sdhC (family_assigned) — succinate dehydrogenase%2C cytochrome b556 subunit sdhC Rv0760c (family_assigned) — ketosteroid isomerase family protein Rv0760c Rv1817 (family_assigned) — FAD-binding protein Rv1817 chsH1 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH1 echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 csd (requalified) — cysteine desulfurase csd sufC (requalified) — Fe-S cluster assembly ATPase SufC sufC sufD (requalified) — Fe-S cluster assembly protein SufD sufD Rv1466 (requalified) — metal-sulfur cluster assembly factor Rv1466 sufB (requalified) — intein-containing Fe-S cluster assembly protein Su sufB moeB1 (requalified) — adenylyltransferase/sulfurtransferase MoeZ moeB1 moeB2 (requalified) — molybdenum cofactor biosynthesis protein MoeB moeB2 trmU (requalified) — tRNA 2-thiouridine(34) synthase MnmA trmU sseB (requalified) — sulfurtransferase sseB cysA2 (requalified) — sulfurtransferase cysA2 fadD3 (requalified) — 3-((3aS%2C4S%2C7aS)-7a-methyl-1%2C5-dioxo-octahydr fadD3 Rv3566A (dark) — hypothetical protein Rv3566A gltB (family_assigned) — glutamate synthase large subunit gltB fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB Rv1176c (family_assigned) — PadR family transcriptional regulator Rv1176c narH (family_assigned) — nitrate reductase subunit beta narH Rv0885 (requalified) — diiron oxygenase Rv0885 Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c fdxB (requalified) — fatty acid desaturase fdxB sirA (requalified) — sulfite reductase sirA cysH (requalified) — phosphoadenylyl-sulfate reductase cysH metC (requalified) — bifunctional o-acetylhomoserine/o-acetylserine sul metC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.