MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3559c · 29 genes shown · anchor fadE30 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3559c (family_assigned) — SDR family oxidoreductase Rv3559c fadE30 (family_assigned) — acyl-CoA dehydrogenase family protein fadE30 fadE31 (family_assigned) — acyl-CoA dehydrogenase family protein fadE31 fas (requalified) — fatty acid synthase fas fadD3 (requalified) — 3-((3aS%2C4S%2C7aS)-7a-methyl-1%2C5-dioxo-octahydr fadD3 fadE33 (family_assigned) — acyl-CoA dehydrogenase family protein fadE33 fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD Rv3552 (family_assigned) — CoA-transferase subunit beta Rv3552 Rv3553 (requalified) — nitronate monooxygenase Rv3553 fadE32 (family_assigned) — acyl-CoA dehydrogenase family protein fadE32 Rv0769 (family_assigned) — SDR family oxidoreductase Rv0769 Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 fabG2 (requalified) — 3-oxoacyl-ACP reductase FabG fabG2 echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 pks7 (requalified) — type I polyketide synthase pks7 pks17 (requalified) — polyketide synthase pks17 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mas (requalified) — mycocerosate synthase mas accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 pks6 (requalified) — membrane bound polyketide synthase pks6 aspB (requalified) — pyridoxal phosphate-dependent aminotransferase aspB kasA (requalified) — 3-oxoacyl-ACP synthase KasA kasA kasB (requalified) — 3-oxoacyl-ACP synthase 2 kasB pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks12 (requalified) — type I polyketide synthase pks12 Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c htdY (requalified) — 3-hydroxyacyl-thioester dehydratase HtdY htdY Rv3538 (requalified) — dehydrogenase Rv3538

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.