MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3557c · 46 genes shown · anchor fadA6 · open gene page → · ← back to 1 hop

Evidence: Min score 0
kstR2 (family_assigned) — TetR family transcriptional regulator KstR2 kstR2 fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 Rv0158 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0158 ethR (family_assigned) — HTH-type transcriptional regulator EthR ethR Rv3060c (family_assigned) — FCD domain-containing protein Rv3060c Rv3555c (family_assigned) — DUF559 domain-containing protein Rv3555c kstR (family_assigned) — cholesterol catabolism transcriptional regulator K kstR Rv3521 (family_assigned) — hypothetical protein Rv3521 Rv3552 (family_assigned) — CoA-transferase subunit beta Rv3552 chsH2 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH2 chsH1 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH1 PPE64 (family_assigned) — PPE family protein PPE64 PPE64 fadE30 (family_assigned) — acyl-CoA dehydrogenase family protein fadE30 fadB (requalified) — fatty oxidation protein FadB fadB fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 acs (requalified) — acetate--CoA ligase acs scoB (family_assigned) — succinyl-CoA--3-ketoacid CoA transferase subunit B scoB glcB (requalified) — malate synthase G glcB Rv3488 (family_assigned) — PadR family transcriptional regulator Rv3488 Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 Rv1019 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1019 Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 nei (requalified) — endonuclease VIII Nei2 nei lhr (requalified) — ATP-dependent helicase lhr adnA (requalified) — ATP-dependent DNA helicase AdnA adnA Rv2191 (family_assigned) — hypothetical protein Rv2191 Rv0804 (family_assigned) — CPBP family intramembrane glutamic endopeptidase Rv0804 fadE34 (requalified) — acyl-CoA dehydrogenase fadE34 ltp4 (family_assigned) — thiolase domain-containing protein ltp4 ltp3 (family_assigned) — thiolase domain-containing protein ltp3 ltp2 (requalified) — lipid-transfer protein ltp2 Rv3520c (requalified) — coenzyme F420-dependent oxidoreductase Rv3520c Rv0940c (family_assigned) — TIGR03619 family F420-dependent LLM class oxidored Rv0940c Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c Rv3553 (requalified) — nitronate monooxygenase Rv3553 Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c Rv3559c (family_assigned) — SDR family oxidoreductase Rv3559c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.