MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3555c · 46 genes shown · anchor fadA6 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3555c (family_assigned) — DUF559 domain-containing protein Rv3555c nei (requalified) — endonuclease VIII Nei2 nei lhr (requalified) — ATP-dependent helicase lhr adnA (requalified) — ATP-dependent DNA helicase AdnA adnA Rv2191 (family_assigned) — hypothetical protein Rv2191 fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 Rv0804 (family_assigned) — CPBP family intramembrane glutamic endopeptidase Rv0804 gltB (family_assigned) — glutamate synthase large subunit gltB disA (requalified) — DNA integrity scanning diadenylate cyclase DisA disA kstR2 (family_assigned) — TetR family transcriptional regulator KstR2 kstR2 Rv2735c (requalified) — three-Cys-motif partner protein TcmP Rv2735c Rv2345 (family_assigned) — TPM domain-containing protein Rv2345 Rv0767c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0767c Rv2464c (family_assigned) — Fpg/Nei family DNA glycosylase Rv2464c Rv3295 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3295 polA (requalified) — DNA polymerase I polA radA (requalified) — DNA repair protein RadA radA Rv3242c (family_assigned) — ComF family protein Rv3242c adnB (requalified) — ATP-dependent DNA helicase AdnB adnB uvrD2 (requalified) — ATP-dependent DNA helicase UvrD2 uvrD2 nudC (requalified) — NAD(+) diphosphatase nudC Rv3200c (family_assigned) — potassium channel family protein Rv3200c uvrB (family_assigned) — excinuclease ABC subunit UvrB uvrB Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaN (family_assigned) — DNA polymerase III subunit beta dnaN dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c fadB (requalified) — fatty oxidation protein FadB fadB fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 acs (requalified) — acetate--CoA ligase acs scoB (family_assigned) — succinyl-CoA--3-ketoacid CoA transferase subunit B scoB glcB (requalified) — malate synthase G glcB purL (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purL Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c Rv0955 (family_assigned) — DUF6350 family protein Rv0955 Rv2633c (requalified) — non-heme di-iron catalase Rv2633c Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 Rv3896c (requalified) — transglycosylase Rv3896c gltD (family_assigned) — glutamate synthase subunit beta gltD fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB glnA1 (requalified) — type I glutamate--ammonia ligase glnA1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.